Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1314 141 9e-29 seq11470 134 1e-26 seq5979 122 8e-23 seq50814 109 5e-19 >seq1314 Length=105107 Score = 141 bits (156), Expect = 9e-29 Identities = 153/200 (77%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | || || |||||||| || Sbjct 44321 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCTGCTTTCC 44379 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| ||||| |||||||||||||| |||||| ||| Sbjct 44380 AGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 44439 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||||| ||||| |||||||||| || | ||| | ||| ||||| ||||| || Sbjct 44440 GACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCCAGTCAGGGT 44499 Query 133643 TTTTACGAAAATCTGCATGG 133662 ||| ||||| |||||||||| Sbjct 44500 TTTCACGAAGATCTGCATGG 44519 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | || || |||||||| || Sbjct 43865 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCTGCTTTCC 43923 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| ||||| |||||||||||||| |||||| ||| Sbjct 43924 AGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 43983 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||||| ||||| |||||||||| || | ||||| ||| ||||| ||||| || Sbjct 43984 GACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGT 44043 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 44044 CTTCACAAAGATCTGCAT 44061 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| | | | || || |||||||| || Sbjct 44093 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAGCTGCTTTCC 44151 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| ||||||||| ||||| |||||||||||||| |||||| ||| Sbjct 44152 AGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 44211 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||||| ||||| |||||||||| || | ||||| ||| ||||| ||||| || Sbjct 44212 GACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGT 44271 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 44272 CTTCACAAAGATCTGCAT 44289 >seq11470 Length=16648 Score = 134 bits (148), Expect = 1e-26 Identities = 156/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || ||||| ||| || ||| | | | || || || Sbjct 14222 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCCAG 14164 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | || |||| ||||||||| || || ||||| || ||||| ||| Sbjct 14163 CTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGAT 14104 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | ||||| |||||| |||||||||| || | ||||| ||| ||||| Sbjct 14103 CTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 14044 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || ||||| ||||||||| Sbjct 14043 TGTGAGGGTCTTGACGAAGATCTGCATG 14016 >seq5979 Length=32993 Score = 122 bits (134), Expect = 8e-23 Identities = 99/120 (83%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 ||||||| |||||||||| |||||| |||||||| ||||| ||||| ||||| || | Sbjct 3631 TGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGT 3572 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983 ||||||||| |||||| |||||||||||||||||||| || ||| || ||| ||||| Sbjct 3571 TGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTCCGTCTGCG 3512 Score = 109 bits (120), Expect = 5e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 148514 GTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGT 148573 ||| ||||||||| | |||||||| |||||||| ||||| || ||| ||||||| || || Sbjct 4748 GTAGGGTCCGTGCTCGGCCGCCAGCTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGT 4689 Query 148574 CTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCG 148633 |||| || || |||||||||||| ||| | ||| ||| | || | |||| | | Sbjct 4688 CTCGAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAG 4629 Query 148634 CACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTG 148681 | || |||||||| |||||||| || || | || || |||| ||| Sbjct 4628 GATGAAGGCGTCGGCCAGGCCCTGCACCCCGATCCCGATCGGCCTGTG 4581 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 148264 CCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGTTCAA 148323 ||||||| ||||| |||| |||||||| || |||| |||||| || | || || | Sbjct 5711 CCACCTGGAACTCTCCGGAAAGCACGCGGCGGGTGTACAGGTTGCTGGTGTAGGGCTCCA 5652 Query 148324 ACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCA 148383 |||||||||||||||| ||||| ||||| | |||||||||||| || | ||||| Sbjct 5651 TGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATGGGGGCCAGCAGCA 5592 Query 148384 G 148384 | Sbjct 5591 G 5591 >seq50814 Length=1495 Score = 109 bits (120), Expect = 5e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 148514 GTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGT 148573 ||| ||||||||| | |||||||| |||||||| ||||| || ||| ||||||| || || Sbjct 588 GTAGGGTCCGTGCTCGGCCGCCAGCTCGCAGCTGGCCTCCAGGGCGGCGTAGTAGATGGT 529 Query 148574 CTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCG 148633 |||| || || |||||||||||| ||| | ||| ||| | || | |||| | | Sbjct 528 CTCGAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCTCTCGAAGGGGAAGCGCATCAG 469 Query 148634 CACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTG 148681 | || |||||||| |||||||| || || | || || |||| ||| Sbjct 468 GATGAAGGCGTCGGCCAGGCCCTGCACCCCGATCCCGATCGGCCTGTG 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481464516877600