Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq8027 246 3e-60 seq385 116 4e-21 seq570 102 9e-17 >seq8027 Length=58046 Score = 246 bits (272), Expect = 3e-60 Identities = 587/876 (67%), Gaps = 11/876 (1%) Strand=Plus/Minus Query 162121 TCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGAT 162180 ||||||||||| ||||| || || || |||| || ||||| || || || Sbjct 52166 TCGAACTTGTTGGCGAAGAGCTGCGGC---TTCTGCAGCATCCAGCCCAGGTCGCCGACG 52110 Query 162181 CCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGC-CCCATC 162239 ||| | ||||| | |||||||||||| ||| ||||| ||||| |||| ||| ||| || Sbjct 52109 CCGTAGACGCAGATGGACCGCACGTGGTGGCCCCTGCAGGGCGGGTACATGGCGCCCTTC 52050 Query 162240 GTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGA 162299 | || | ||||||| |||| |||||||| || | || | || || | | ||| | Sbjct 52049 G-CCTCCGCCCCCTCAAAGTACTGCCACTTCACCAGCCGGGCGAGGGCGTTGACGTCCGT 51991 Query 162300 GGTGTCGTACTTGTACACTGACGGCACG-GCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 |||||| || || || | | | || || || || |||| ||||| || | Sbjct 51990 CACGTCGTAGCGGTGGT-TGCTGGGAAGCGACCCGGGCACGCCGGGCATCCTCTGCAGCG 51932 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 | ||||||||| ||||| || || || ||||| | ||||||||| | | || Sbjct 51931 TCGCCCACAGGAACTCGTCGGGGCTGTAGCCGTCCTTGGCCCACTCCATCAGCCGCCGCG 51872 Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478 || | || | || | | | |||| | | || | | || | | ||| || | | Sbjct 51871 CCCTGGGGTCCTCCAGCACGAAGCGGACGAACGCCCGGCTGACCACGACGTAGGCCCCGC 51812 Query 162479 CAGAAAACA-CGG-GTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTAC 162536 | | |||| ||| || | || | ||||| || | ||||| | |||| | | Sbjct 51811 CCGCGAACATCGGCGTCT-CG-ACGGGAGGCGGGGCCTTGTCCTTCTCCGTCCTCCGGAT 51754 Query 162537 CATTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTG 162596 || || | ||| ||| | |||| |||||| ||| ||| || | || | Sbjct 51753 GGCGCCGTCCGCCACCTCGTAGCGCTTCTTCCACCGCGCCTCCTTGGAGGGCGGCGTCTT 51694 Query 162597 TTCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATT 162656 || ||||| || ||||| ||| || |||| ||||||| ||||||||||| || || Sbjct 51693 CTCCGTCTCCAGGCTGTTCTTCCCCTGCAGGGCCCTCAGCTGGCGCACCATCTCCAGGTT 51634 Query 162657 GGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAG 162716 |||||| || || ||||| |||||| || || | | || |||| ||||| | Sbjct 51633 GGTCTTCAGCGGGAAGTCCTGGCCGCACAGGTTGACGAAGTACCTCCAGGGGGCGCTGTG 51574 Query 162717 TCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACAC 162776 |||||| || | ||||| || |||||||| || | ||||| |||||||| Sbjct 51573 GTTGTACAGGTCGCCCATGCAGTTGAGGTCGGCCTGCACCCTGCTCCAGCTGGCGTACAC 51514 Query 162777 GACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCAC 162836 |||||||||| || |||||| ||||| |||||||| || || | ||| | ||| Sbjct 51513 CACGCTCTCCAGCCGGCTGGCGATGAAGACGTTGTCGAAGCAGGAGGCGATCTGCCGCAC 51454 Query 162837 GGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGG 162896 ||||| ||| ||| ||| || || || ||||| |||||||| || ||||| || Sbjct 51453 GGCCAAGAGGAAGGTCGACGGCGCCTTGCTGTCCACGTGGACGCAGTACAGGTTCTGGGG 51394 Query 162897 GGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGA 162956 ||||||| ||||||||| | |||||||| ||| ||||| ||||| ||||| || || Sbjct 51393 CGCGTAGACGGCCCTCAGCAGCCTCTCGAAGGTCTGGATCTTGTGGTGGACCACAATGGA 51334 Query 162957 ATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAG 162992 ||||| |||||||||| ||||||||||| || || Sbjct 51333 GTACGCGATGGGGAACTGGGCCTCCTCGCGGCTCAG 51298 >seq385 Length=209995 Score = 116 bits (128), Expect = 4e-21 Identities = 272/403 (67%), Gaps = 8/403 (2%) Strand=Plus/Plus Query 162640 CGCACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATAT 162699 ||||| ||||| || || || | ||| ||||||||||||||| || | | || Sbjct 167254 CGCACGATCTCCGCGTTCGTTTTGATGGGGAAGTCGGTGCCGCAGGTGTTGAGCAGGTAC 167313 Query 162700 TTCCACTTAAC-GCTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCG 162758 |||| || | || | | | || |||| | ||||| || || || || || || Sbjct 167314 CGCCACCGGACCGGCGACTTCATG-AGGTCCTCCATGCAGTTGAGGTCCGCTTGCACCCG 167372 Query 162759 ACTCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACA 162818 ||| |||||||| | |||||||||| ||| |||| ||||| || ||| | || Sbjct 167373 GGACCAGGACGCGTATATCACGCTCTCCAGCCTGCTGGCCACAAACACGTTGGGCAGGCA 167432 Query 162819 CGAAACTATCCCCATCACGGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGT 162876 || || || ||| ||||| || ||| | || || | || | || ||||| Sbjct 167433 GGAGACGATGCCCTGGACGGCAAGCCTGAAGGCCTCTGGG--GACTTGCGGTCCACGTGC 167490 Query 162877 ACGCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATC 162936 |||||||| | || || || |||| || |||| ||| | |||||||||||||| || Sbjct 167491 ACGCAGTACACGTTGTGGGGCACGTATATAGCCCGCAGGAGCCTCTCGAACATCTCGATT 167550 Query 162937 TTATGGTGTACCACGATAGAATACGCTATGGGGAACTCAGCCTCCT-CGCGACTGAGAGA 162995 || | ||| ||||| || || ||||| ||||||||||| ||||| |||| || ||| Sbjct 167551 TTCTCGTGGACCACCATGGAGTACGCGATGGGGAACTCCATCTCCTCCGCG-CTCGGAGT 167609 Query 162996 CCCTGTAAAGTACTTGCGGTCCCTCACAAACGCCGCACAGTCC 163038 || || | | | || | |||||||| | ||| |||||| Sbjct 167610 CCAGGTGAGGAATTTCCTCTCCCTCACGTAAGCCTTGCAGTCC 167652 >seq570 Length=177955 Score = 102 bits (112), Expect = 9e-17 Identities = 231/345 (67%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||| ||| | ||||| | | || | |||||| ||||| || || || ||||| | Sbjct 95298 GCCAGCTCTTTCGGGGAGAGGAAATCATCCACGTGGATGAAGGCATCGCCGGGGACAAAG 95239 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || ||||| |||| ||||| | || || || || || || || || | || | Sbjct 95238 TTCTCGTAGTTCTGCCTCGACGGCCCAAGGACAATCGGCACTGCGCCCACAGCCAGCGGG 95179 Query 177066 CGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAAT 177125 ||| || || || ||||| ||||| |||| | ||||||||| || | ||||||||| Sbjct 95178 TTGTACAGCTTCTCCGTAATGTAGTCTTTGTGGATGGAGTTCTCGAAGGACAGATAGAAT 95119 Query 177126 TTACAGGAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTTC 177185 || ||| | || | |||| ||||| | ||| | || || || | | | | Sbjct 95118 TTGCAGCTGGCTATGATTGGGAAGAAGTTCTGGTCGTTCACGTATTCCCCGAAAGCTTGC 95059 Query 177186 CCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGTG 177244 || || | || || || | || || |||||| |||||| || || | | ||| Sbjct 95058 CCATAGGCGTGAATCTCCACGTACTTGTAGAGCTCGTTGTAGTA-CTTGACACGGATGTG 95000 Query 177245 GTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTT 177289 ||| |||||| |||||||||| |||||| | || ||||||||| Sbjct 94999 CTCGGGGTTCCAGTTGCTGACGATCCAGCAGATTAGCTTGCTCTT 94955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576091230304000