Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq11470 91.5 1e-13 seq1314 89.7 3e-13 >seq11470 Length=16648 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 33544 AAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAAT 33603 || || || ||| ||| || || |||||||| ||||| || ||||| | || |||| Sbjct 14222 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGC 14163 Query 33604 TGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATT 33663 || || |||||||| |||| | |||||| ||| | || | || |||||||| || Sbjct 14162 TGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATC 14103 Query 33664 TTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACC 33722 || |||| | | ||| ||||||||| | ||||| || | ||||| || || || Sbjct 14102 TTGGCCTTCA-CGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCC 14044 Query 33723 TGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| | || || || ||||||||||| Sbjct 14043 TGTGAGGGTCTTGACGAAGATCTGCAT 14017 >seq1314 Length=105107 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | ||| | |||| || ||||| ||| || || |||||||| ||||| Sbjct 43835 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 43894 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || ||||| ||||| |||| | |||||| || | || Sbjct 43895 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 43954 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| |||||| || | ||||| Sbjct 43955 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCCAC 44013 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || |||||||||||||| Sbjct 44014 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44061 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | ||| | |||| || ||||| ||| || || |||||||| ||||| Sbjct 44063 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 44122 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || ||||| ||||| |||| | |||||| || | || Sbjct 44123 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44182 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| |||||| || | ||||| Sbjct 44183 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCCAC 44241 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || |||||||||||||| Sbjct 44242 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44289 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | ||| | |||| || ||||| ||| || || |||||||| ||||| Sbjct 44291 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 44350 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || ||||| ||||| |||| | |||||| || | || Sbjct 44351 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44410 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | ||| ||| |||||| || | ||||| Sbjct 44411 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCCAC 44469 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || | || || || || || || | ||||| || ||||||||||| || Sbjct 44470 CTCCAGGGTAATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCATGGT 44520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327407071660800