Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5979 95.1 1e-14 seq1314 89.7 5e-13 seq11470 86.0 6e-12 >seq5979 Length=32993 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 147503 TGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGAT 147562 |||||| |||||| |||| ||||||||||||||| || ||| |||| || ||||| | Sbjct 3631 TGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCCCAGGTTCTGCTGGT 3572 Query 147563 TGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTC 147614 |||| || || ||||| ||||| ||| | |||||||| || ||| ||||| Sbjct 3571 TGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCCCGTCTC 3520 >seq1314 Length=105107 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||| || ||| || |||||| ||||| || || | Sbjct 44322 TTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAG 44381 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| || | ||| || || ||||| |||||||| || || || || || | Sbjct 44382 CAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA 44441 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | || || | |||||||| || | || | || || |||||||| |||| Sbjct 44442 CATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTTT 44501 Query 132108 TTATGAAAATCTGCATG 132124 | | ||| ||||||||| Sbjct 44502 TCACGAAGATCTGCATG 44518 >seq11470 Length=16648 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| || ||| || |||||| ||||| || |||| | Sbjct 14210 GACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCA 14151 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||| || ||||| || ||||| ||||| || || || |||| Sbjct 14150 AAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACG 14091 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | |||||||| || | || | || || || || || || || Sbjct 14090 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 14031 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 14030 ACGAAGATCTGCATG 14016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474682473626400