Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq66 100 9e-18
seq35954 98.7 3e-17
seq25747 98.7 3e-17
seq4690 98.7 3e-17
seq2812 98.7 3e-17
seq1249 98.7 3e-17
seq378 98.7 3e-17
seq142 98.7 3e-17
seq41 98.7 3e-17
>seq66
Length=516331
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 90716 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 90775
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 90776 CCCGGGTTTCGGC 90788
>seq35954
Length=2503
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 194 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 135
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 134 CCGGGTTTCGGC 123
>seq25747
Length=4424
Score = 98.7 bits (108), Expect = 3e-17
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |
Sbjct 999 TGGCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 940
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 939 TCCCGGGTTTCGGC 926
>seq4690
Length=46028
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 16768 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 16709
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 16708 CCGGGTTTCGGC 16697
>seq2812
Length=62591
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 8501 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 8442
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 8441 CCGGGTTTCGGC 8430
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 9727 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9668
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 9667 CCGGGTTTCGGC 9656
>seq1249
Length=111659
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 9886 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9945
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 9946 CCGGGTTTCGGC 9957
>seq378
Length=241138
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 143119 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 143178
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 143179 CCGGGTTTCGGC 143190
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 143440 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 143499
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 143500 CCGGGTTTCGGC 143511
>seq142
Length=307107
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 86875 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 86934
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 86935 CCGGGTTTCGGC 86946
>seq41
Length=463117
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 246880 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 246821
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 246820 CCGGGTTTCGGC 246809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15793478052300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |