Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5979 111 2e-18 seq794 105 1e-16 seq156714 104 3e-16 seq27479 104 3e-16 seq18799 100 4e-15 seq4817 100 4e-15 seq3801 100 4e-15 seq15827 96.9 5e-14 seq14568 89.7 7e-12 seq896 89.7 7e-12 seq12459 86.0 9e-11 >seq5979 Length=32993 Score = 111 bits (122), Expect = 2e-18 Identities = 109/138 (79%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150 ||| | |||| ||| | ||| | | || | ||||| ||||||||||||||| | ||| Sbjct 3487 CAGCTGTGGTACGCCGTCATCGAGTCGCAGACGGAGACGGGCACGCCCTACATGCTGTAC 3546 Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAA 262209 ||||||||| ||||| | ||||||||||||||||||||||||| | || | ||| Sbjct 3547 AAGGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCA-AGTGCAGCAA 3605 Query 262210 CCTGTGCACCGAGATCGT 262227 |||||||||||||||||| Sbjct 3606 CCTGTGCACCGAGATCGT 3623 Score = 100 bits (110), Expect = 4e-15 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 || || ||| ||| |||||||| ||| |||||||||||||| |||||||| |||||| Sbjct 1304 TGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAGCAG 1363 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||| ||||||||||| | ||||| |||||||| | |||| Sbjct 1364 TGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGGGGTGGCCG 1406 Score = 86.0 bits (94), Expect = 9e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 262934 TGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGT 262993 |||| |||| | ||||||||||||| | || | |||||||||||||||| |||| | Sbjct 5592 TGCTGCTGGCCCCCATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCA 5651 Query 262994 TCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTT 263045 | ||| | ||| |||||| | ||||| ||||||||||| || || || || Sbjct 5652 TGGAGCCCTACACCAGCAACCTGTACACCCGCCGCGTGCTTTCCGGAGAGTT 5703 >seq794 Length=141998 Score = 105 bits (116), Expect = 1e-16 Identities = 322/484 (67%), Gaps = 33/484 (7%) Strand=Plus/Minus Query 1600254 CCCTCTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCT 1600313 ||| ||||||||| || | ||||| ||| ||| | | ||| | |||||||| | Sbjct 130544 CCCGCTCCATCTCCCCGAAGCGGATGCCCCCCTGGATGTTCCTCCCCCCAACCGGCTGGT 130485 Query 1600314 TGGTGAGCATCTGGACGGGGCCGCGTGGTCGGG-CGTGAATCTTGTCGATGGCCACGTGG 1600372 |||| | | | | || | || ||||||| | || | ||||||| | ||| |||| Sbjct 130484 TGGTCACCTTGTCC-CGCGCCCCCGTGGTCCTCACCTGGAACTTGTCGGAGACCATGTGG 130426 Query 1600373 CGCAGGGCCTGGTAGTAGACCGGCGCCG-TAAAGATCAACGCCTCCATGGGCTCGCCGGT 1600431 |||||| ||||||||||||| ||||| | ||||| ||||||| |||||| | Sbjct 130425 CGCAGGCGCTGGTAGTAGACCA-CGCCGATGAAGATGTCGGCCTCCA---GCTCGCGGCC 130370 Query 1600432 GTGCGGGTGG---TAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGT-GGCGAGC--CAA 1600485 | | || | |||||| ||| |||||||| | | | | ||| |||| || || Sbjct 130369 GCTCAGGCCGCTGTAGAGCCGCTCGGTGCCGTAGTGGTTGTAGCCGGCGGCGCGCAGCAT 130310 Query 1600486 CTCGGCG----GCGACATCGTCGA--------CGGTGACGCCGCCAAAGGGCGTGCCGTC 1600533 ||| || || || || || ||| || || | ||||||||| |||| Sbjct 130309 GTCGCCGAAGTGCTCCAGCGCCGGGCTCTCCTCGGAGAAGCGG---AAGGGCGTGGCGTC 130253 Query 1600534 GCCCACATAGCCCTCGCGGCAGGCCAC-CTTGCCCAGGAGGGCCTCCATCATCTTGCCCA 1600592 | ||| | || || ||| ||||||| | | ||| || | | |||| | Sbjct 130252 GTGGCAGGCGCCGT-GCAGCGCGCCCGACTTGCCCGCCATGCTCTCGATGAGCATGCCGA 130194 Query 1600593 TGGTCATGCGCGACGGGATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGC 1600652 ||||||||||||| |||| | |||||||||||| || ||||||||||| ||| | | Sbjct 130193 TGGTCATGCGCGAGGGGAAGCCGTGCGGGTTGAACAGGATGTCGGGCGTCATGCCG-CTC 130135 Query 1600653 GAGGCGACCAGGGCATGTCCTCGGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGT 1600712 || || ||||||||||||||| || | || | || || | ||||||| || |||| Sbjct 130134 TCGGTGA--AGGGCATGTCCTCGGCGGGCCACAGCCGGCTCAGGATGCCCTTCTGCCCGT 130077 Query 1600713 GGCG 1600716 | || Sbjct 130076 GCCG 130073 >seq156714 Length=473 Score = 104 bits (114), Expect = 3e-16 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | ||||| ||||| || |||| |||| || ||| ||||| Sbjct 365 TACAAGGTGTTGAAGCAAGTGCATCCTGACACCGG-----CATC-TCTTCCAAAGCCATG 312 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| | ||| || || Sbjct 311 GGCATCATGAACTCATTTGTCAACGACATTTTCGAGCGCATCGCCGGTGAGTCCTCCCGT 252 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | || ||||||||| ||| ||| | | ||||||||||| || ||||| Sbjct 251 TTGGCTCACTACAACAAGCGGTCCACCATCACTTCAAGGGAGATCCAGACTGCAGTGCGT 192 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||| || || ||||| || Sbjct 191 CTTCTGCTGCCCGGAGAGCTGGCCAAACACGCAGTGTCTGAGGGAAC 145 >seq27479 Length=8994 Score = 104 bits (114), Expect = 3e-16 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | ||||| ||||| || |||| |||| || ||| ||||| Sbjct 1230 TACAAGGTGTTGAAGCAAGTGCATCCTGACACCGG-----CATC-TCTTCCAAAGCCATG 1177 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||||||||| |||| ||||||| | ||| || || Sbjct 1176 GGCATCATGAACTCATTTGTCAACGACATTTTCGAGCGCATCGCCGGTGAGTCCTCCCGT 1117 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | || ||||||||| ||| ||| | | ||||||||||| || ||||| Sbjct 1116 TTGGCTCACTACAACAAGCGGTCCACCATCACTTCAAGGGAGATCCAGACTGCAGTGCGT 1057 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| ||| || ||||||| ||||| || || ||||| || Sbjct 1056 CTTCTGCTGCCCGGAGAGCTGGCCAAACACGCAGTGTCTGAGGGAAC 1010 >seq18799 Length=8091 Score = 100 bits (110), Expect = 4e-15 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 || || ||| ||| |||||||| ||| |||||||||||||| |||||||| |||||| Sbjct 712 TGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAGCAG 653 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 ||||| ||||||||||| | ||||| |||||||| | |||| Sbjct 652 TGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGGGGTGGCCG 610 >seq4817 Length=40048 Score = 100 bits (110), Expect = 4e-15 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || || ||| | || ||||||||||| || ||| |||||||| || | ||| Sbjct 1632 TATAAAGTGTTAAAACAGGTGCACCCGGACAC---TGGCATCTCCTCCAA--AG-CAATG 1685 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| |||||||| ||||| |||| ||||||| || || |||| Sbjct 1686 GGCATCATGAACTCTTTTGTCAATGACATTTTCGAGCGCATCGCAGGTGAAGCTTCTCGC 1745 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 | || | | ||||||||| || ||| | ||||||||||||||||| ||||| Sbjct 1746 TTAGCCCATTACAACAAGCGGTCAACCATCACGTCACGCGAGATCCAGACCGCTGTGCGA 1805 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| || || |||||| ||||||||| || ||||| || Sbjct 1806 CTGCTGCTGCCTGGAGAGTTGGCCAAGCACGCCGTGTCTGAGGGTAC 1852 >seq3801 Length=96339 Score = 100 bits (110), Expect = 4e-15 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||| || || || || | | ||| || |||| | ||| Sbjct 86639 TACAAGGTGCTGAAGCAAGTTCATCCTGACACTGGT-----ATC-TCGTCCAAGGCAATG 86586 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||||||||||||||||||| |||| || || | ||| | ||| Sbjct 86585 GGGATCATGAACTCGTTTGTCAACGACATTTTCGAGCGTATTGCTGGTGAGTCTTCTCGT 86526 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | || ||||||||| || ||| | | ||||| ||||||||||||||| Sbjct 86525 TTGGCTCACTACAACAAGCGTTCTACCATCACTTCAAGGGAGATTCAGACCGCCGTGCGC 86466 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 ||| | ||| || || ||||| | ||||| || || |||||||| Sbjct 86465 CTGCTGCTGCCAGGAGAGCTGGCTAAACACGCTGTGTCTGAGGGCAC 86419 Score = 95.1 bits (104), Expect = 2e-13 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCT 725035 ||||||||||||||||||||||||||| |||| || || | ||| | ||| | Sbjct 82474 GATCATGAACTCGTTTGTCAACGACATTTTCGAGCGTATTGCTGGTGAGTCTTCTCGTTT 82415 Query 725036 GGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCT 725095 ||| | || ||||||||| || ||| | | ||||| ||||||||||||||||| Sbjct 82414 GGCTCACTACAACAAGCGTTCTACCATCACTTCAAGGGAGATTCAGACCGCCGTGCGCCT 82355 Query 725096 GATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | | ||| || || ||||| | ||||| || || |||||||| Sbjct 82354 GCTGCTGCCAGGAGAGCTGGCTAAACACGCTGTGTCTGAGGGCAC 82310 >seq15827 Length=17097 Score = 96.9 bits (106), Expect = 5e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024 ||| ||||| ||||||||||| |||||||||||||| | || ||||| | ||| Sbjct 9298 AAGGCCATGGGCATCATGAACTCCTTTGTCAACGACATTTTTGAACGCATTGCTGGTGAG 9357 Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACC 725084 | || |||| | | ||||||||| ||| ||| | || | ||||| |||||| Sbjct 9358 TCTTCCCGTTTGGCTCATTACAACAAGCGTTCCACCATCACCTCGAGGGAGATTCAGACC 9417 Query 725085 GCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 |||||||||||| | ||| || || ||||| | ||||| || || |||||||| Sbjct 9418 GCCGTGCGCCTGTTGCTGCCTGGAGAGCTGGCTAAACACGCTGTGTCTGAGGGCAC 9473 >seq14568 Length=18141 Score = 89.7 bits (98), Expect = 7e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | || ||||| || || | || || || | || ||||| |||||||||||| Sbjct 7892 CGCTTCAGCAAGGAGGTGCAGGTGACGGAAGCCCGCTGTTTCTACGGTTTCCAGATCGCC 7833 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||| |||||||| | ||| || ||||||||||||||| |||||||| Sbjct 7832 ATGGAGAACATACACTCTGAGATGTACAGCCTGCTGATCGACACCTACATCAAGGAC 7776 >seq896 Length=134646 Score = 89.7 bits (98), Expect = 7e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1455964 GAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATC 1456023 ||||||||| || |||| ||||| | || ||||| ||||| ||||| || || |||||| Sbjct 21504 GAGGTCCAAGTGACAGAAGCACGGTGTTTCTACGGATTCCAAATCGCGATGGAGAACATC 21445 Query 1456024 CACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 ||||| |||| ||| || || || ||||||||| |||| ||||| Sbjct 21444 CACTCCGAAATGTACAGCCTGCTCATTGACACCTACATCAAAGACCC 21398 >seq12459 Length=30431 Score = 86.0 bits (94), Expect = 9e-11 Identities = 156/227 (69%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||| | ||||| ||||| || |||| |||| || ||| ||||| Sbjct 29881 TACAAGGTGTTGAAGCAAGTGCATCCTGACACCGG-----CATC-TCTTCCAAAGCCATG 29934 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||||||||||||| || | || || || | ||| | || Sbjct 29935 GGGATCATGAACTCGTTTGTCAACGATATTTTTGAGCGTATTGCTGGTGAGTCTTCCCGT 29994 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 |||| | | ||||||||| ||| ||| | | ||||| ||||||||||||||| Sbjct 29995 TTGGCTCATTACAACAAGCGATCCACCATCACTTCAAGGGAGATTCAGACCGCCGTGCGC 30054 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || | ||| || || ||||| | ||||| || || |||||||| Sbjct 30055 CTACTACTGCCGGGAGAGCTGGCTAAACACGCAGTGTCTGAGGGCAC 30101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7146585881965880