Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1314 134 1e-26
seq11470 122 8e-23
>seq1314
Length=105107
Score = 134 bits (148), Expect = 1e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || |||||
Sbjct 43870 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAA 43929
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || ||||||||| | ||||| || ||||||||| |||||| ||| | | |
Sbjct 43930 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 43989
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 43990 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 44049
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 44050 AAAGATCTGCAT 44061
Score = 134 bits (148), Expect = 1e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || |||||
Sbjct 44098 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAA 44157
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || ||||||||| | ||||| || ||||||||| |||||| ||| | | |
Sbjct 44158 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 44217
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| ||||| || || || |||| || |||||
Sbjct 44218 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 44277
Query 35725 AAATATCTGCAT 35736
||| ||||||||
Sbjct 44278 AAAGATCTGCAT 44289
Score = 131 bits (144), Expect = 2e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || |||||
Sbjct 44326 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAA 44385
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || ||||||||| | ||||| || ||||||||| |||||| ||| | | |
Sbjct 44386 GATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 44445
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || | |||||||||| || || || || || |||| ||||||||
Sbjct 44446 CTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTTTTCAC 44505
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 44506 GAAGATCTGCAT 44517
>seq11470
Length=16648
Score = 122 bits (134), Expect = 8e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || | || ||||||||||| || |||||
Sbjct 14208 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 14149
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| || ||||||||| | |||| || ||| |||||| |||||| ||||| |
Sbjct 14148 GATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTT 14089
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||||| | |||||||||| ||||| || || || || | || || ||
Sbjct 14088 CTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGAC 14029
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 14028 GAAGATCTGCAT 14017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448969350999200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |