Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5979 91.5 2e-13 >seq5979 Length=32993 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798 ||| ||||| |||||||| | || || ||||||| ||| | ||| |||||||| Sbjct 3645 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 3586 Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858 || ||||| || || ||| ||| || || |||||||| |||||||| ||||| || Sbjct 3585 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCC 3526 Query 118859 CGTCTCCGTTTGGGACTTGA 118878 ||||||||| || |||| || Sbjct 3525 CGTCTCCGTCTGCGACTCGA 3506 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/148 (74%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 119030 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 119089 ||| |||| ||||||||||||||| ||||||||||| || |||||||||| ||| || Sbjct 2777 CTCCACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCG 2718 Query 119090 -AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 119148 ||| || | ||||| || || || ||||| || || | ||| || ||||| Sbjct 2717 CTGCTCCTCCTTCCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCC 2659 Query 119149 ACGGTTCCAGGTACACCGCGATTGACCC 119176 | || |||||||||| |||| || ||| Sbjct 2658 AGGGCTCCAGGTACATGGCGAATGCCCC 2631 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 ||| | ||||| ||||| | | |||| ||||| |||| ||| ||||| |||||||| ||| Sbjct 5670 TTGCTGGTGTAGGGCTCCATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTG 5611 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTT 118273 |||||||| |||| || |||||||| Sbjct 5610 GGCATGGGGGCCAGCAGCAGGCTGTT 5585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615932547354400