Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5979 91.5 2e-13
>seq5979
Length=32993
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798
||| ||||| |||||||| | || || ||||||| ||| | ||| ||||||||
Sbjct 3645 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 3586
Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858
|| ||||| || || ||| ||| || || |||||||| |||||||| ||||| ||
Sbjct 3585 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCC 3526
Query 118859 CGTCTCCGTTTGGGACTTGA 118878
||||||||| || |||| ||
Sbjct 3525 CGTCTCCGTCTGCGACTCGA 3506
Score = 84.2 bits (92), Expect = 3e-11
Identities = 109/148 (74%), Gaps = 2/148 (1%)
Strand=Plus/Minus
Query 119030 CTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCG 119089
||| |||| ||||||||||||||| ||||||||||| || |||||||||| ||| ||
Sbjct 2777 CTCCACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCG 2718
Query 119090 -AGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCC 119148
||| || | ||||| || || || ||||| || || | ||| || |||||
Sbjct 2717 CTGCTCCTCCTTCCCCGTG-TTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCC 2659
Query 119149 ACGGTTCCAGGTACACCGCGATTGACCC 119176
| || |||||||||| |||| || |||
Sbjct 2658 AGGGCTCCAGGTACATGGCGAATGCCCC 2631
Score = 84.2 bits (92), Expect = 3e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247
||| | ||||| ||||| | | |||| ||||| |||| ||| ||||| |||||||| |||
Sbjct 5670 TTGCTGGTGTAGGGCTCCATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTG 5611
Query 118248 GGCATGGGTGCCATGAGAAGGCTGTT 118273
|||||||| |||| || ||||||||
Sbjct 5610 GGCATGGGGGCCAGCAGCAGGCTGTT 5585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615932547354400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |