Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14568 84.2 3e-11 seq5979 82.4 9e-11 >seq14568 Length=18141 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 94803 TGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-G 94861 |||||| | | ||||| || ||| || || ||||| ||||| ||||| || ||| | Sbjct 7147 TGAGCGTGTGGTGGCATTCGCAGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTT-TGCTG 7089 Query 94862 CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTA 94921 | || | ||||| ||||| ||||| |||||||| || || ||||||||||||||| | Sbjct 7088 CCATCTTCTGGCTGAAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCA 7029 Query 94922 TCTCTCGTGACGAGGGAC 94939 || || ||||||| || Sbjct 7028 TCAGCCGAGACGAGGTAC 7011 >seq5979 Length=32993 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 104610 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 104669 |||| | || || ||||| |||||| || ||| | |||||||| ||| || | Sbjct 2638 TCGCCATGTACCTGGAGCCCTGGCACTTTGACATCTTCGAGTTCCTGGAGCTGAAGAAGA 2697 Query 104670 ACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 104729 || || | |||||| |||| ||||||||||||| ||| |||||||| || || | Sbjct 2698 ACACGGGGAAGGAGGAGCAGCGGGCTCGCGATCTCTTCTACGCCCTCTGGATCCCCGACC 2757 Query 104730 TCTTCATGAAGAGAGTTGAG 104749 ||||||||||||| || ||| Sbjct 2758 TCTTCATGAAGAGGGTGGAG 2777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580900489357600