Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq18799 111 2e-19 seq5979 111 2e-19 seq14568 107 2e-18 seq50814 91.5 2e-13 seq896 87.8 2e-12 >seq18799 Length=8091 Score = 111 bits (122), Expect = 2e-19 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 ||||||||||| |||| |||||||| |||||||| |||||||||||||| ||||| ||| Sbjct 715 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 656 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 ||||||| | ||||||||| | ||||||| |||||| Sbjct 655 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGGG 617 Score = 105 bits (116), Expect = 7e-18 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 ||||||||||||| | ||||||||| | ||||||| ||| ||||| |||||||||||| Sbjct 618 CCGATGCCCCCGGCGGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCGTAGATGCCC 677 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751 ||||| |||||||||||| || | |||||| ||||| Sbjct 678 TCGATGCTGTCGTCCTTCATGGCCAGCAGGAAACAGCT 715 >seq5979 Length=32993 Score = 111 bits (122), Expect = 2e-19 Identities = 84/99 (85%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 ||||||||||| |||| |||||||| |||||||| |||||||||||||| ||||| ||| Sbjct 1301 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 1360 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 ||||||| | ||||||||| | ||||||| |||||| Sbjct 1361 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGGG 1399 Score = 105 bits (116), Expect = 7e-18 Identities = 82/98 (84%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 ||||||||||||| | ||||||||| | ||||||| ||| ||||| |||||||||||| Sbjct 1398 CCGATGCCCCCGGCGGATTTGGAGATGAGGGCGCACTGCTTCAGCGTGTCGTAGATGCCC 1339 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCT 79751 ||||| |||||||||||| || | |||||| ||||| Sbjct 1338 TCGATGCTGTCGTCCTTCATGGCCAGCAGGAAACAGCT 1301 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 |||| ||| ||| |||||||||||| |||||||| ||||| |||||| ||||| | Sbjct 2778 TCTCCACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCC 2719 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 || |||||| | ||| |||| |||||| || || || | |||||| ||||| Sbjct 2718 GCTGCTCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCC 2659 Query 79490 ACGGCTCCAGATAGATGGCGAA 79511 | |||||||| || |||||||| Sbjct 2658 AGGGCTCCAGGTACATGGCGAA 2637 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 78221 CCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTGGCCAGACTCGGGTTCTCC-ATG 78279 ||| |||||| ||||| | |||||| || | |||||| || | | ||| || | ||| Sbjct 6440 CCTGCTTCCAGCCGTAGAAGTGCATGCTGGTGAGCTTG-CCGTAGTTGGGCTCGGCGATG 6382 Query 78280 AAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATG 78339 |||||| || |||||| |||||||||| | || ||||||||||| ||||| | |||| Sbjct 6381 TGGATGTTCAGGGACTGGCTCTGGTCGATGAAGGCCCCGCGGTCGGCGGCCATCTTGATG 6322 Query 78340 ACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 | | ||| || | |||||||| | |||| Sbjct 6321 ATGGTCTTCTGAGAGATCTCCCACACGGTC 6292 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 20080 GTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCAT 20139 ||| |||| | ||| ||||||||| |||||| || |||||||||||||||| ||||| Sbjct 4568 GTCCAATAAGTTGCACAGGCCGATCGGGATCGGGGTGCAGGGCCTGGCCGACGCCTTCAT 4627 Query 20140 GATGCTCGGCCTCTCATTCGACGATCCC-AAGGCGCGCGAGCTCAACAAGGGCATCTTCG 20198 || | || || | ||||| || ||| |||| | |||||||| ||||||| Sbjct 4628 CCTGATGCGCTTCCCCTTCGA-GAGCCCGGAGGCCCAGCTGCTCAACAGCCAGATCTTCG 4686 Query 20199 AGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGT 20258 || || | ||| |||| ||||| || ||||| || || ||| |||| || | Sbjct 4687 AGACCATCTACTACGCCGCCCTGGAGGCCAGCTGCGAGCTGGCGGCCGAGCACGGACCCT 4746 Query 20259 ACGAGACGTTCAAGGGGTCGCCCG 20282 ||||||| | | ||| ||||||| Sbjct 4747 ACGAGACCTACGCGGGCTCGCCCG 4770 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 79080 CTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCC 79139 ||||||| ||| | ||| | ||| || ||||||| || ||||||||||||| Sbjct 3645 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 3586 Query 79140 GATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCC 79199 | ||||| |||||||||||| ||| |||||||||||||| |||||| ||||| || Sbjct 3585 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTACAGCATGTAGGGCGTGCC 3526 Query 79200 GGTCTC 79205 ||||| Sbjct 3525 CGTCTC 3520 >seq14568 Length=18141 Score = 107 bits (118), Expect = 2e-18 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 |||||||| ||||| ||||| || ||||| ||| || |||||||| || || || ||| Sbjct 7122 GTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCTGCCATCTTCTGGCTGAAGAAACGAGGC 7063 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 |||||||||||||||| |||||||||||||| || ||| ||||||| Sbjct 7062 CTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACGAGG 7014 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 60339 GTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTT 60398 ||| | ||||| ||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct 6152 GTGGAGAACCCCTTCGACTTCATGGAGAACATCTCCCTGGAGGGGAAGACCAACTTCTTT 6093 Query 60399 GAGAAGCGGGTCGGGGATTA 60418 |||||||| || ||||| || Sbjct 6092 GAGAAGCGTGTGGGGGAGTA 6073 >seq50814 Length=1495 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 20080 GTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCAT 20139 ||| |||| | ||| ||||||||| |||||| || |||||||||||||||| ||||| Sbjct 408 GTCCAATAAGTTGCACAGGCCGATCGGGATCGGGGTGCAGGGCCTGGCCGACGCCTTCAT 467 Query 20140 GATGCTCGGCCTCTCATTCGACGATCCC-AAGGCGCGCGAGCTCAACAAGGGCATCTTCG 20198 || | || || | ||||| || ||| |||| | |||||||| ||||||| Sbjct 468 CCTGATGCGCTTCCCCTTCGA-GAGCCCGGAGGCCCAGCTGCTCAACAGCCAGATCTTCG 526 Query 20199 AGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGT 20258 || || | ||| |||| ||||| || ||||| || || ||| |||| || | Sbjct 527 AGACCATCTACTACGCCGCCCTGGAGGCCAGCTGCGAGCTGGCGGCCGAGCACGGACCCT 586 Query 20259 ACGAGACGTTCAAGGGGTCGCCCG 20282 ||||||| | | ||| ||||||| Sbjct 587 ACGAGACCTACGCGGGCTCGCCCG 610 >seq896 Length=134646 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 59989 TAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047 |||| ||||| ||| || |||||||||||||||||||| ||||| | | || |||||| Sbjct 20714 TAGCCTTTGC-TGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 20656 Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 | || ||| | || || ||||| || || | ||||||||||||||||| Sbjct 20655 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGAT 20606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546305057265600