Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1873 95.1 1e-14 seq896 91.5 2e-13 seq18799 87.8 2e-12 seq5979 87.8 2e-12 seq14568 84.2 2e-11 >seq1873 Length=117512 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 |||||||||||||| | |||||||| |||||||| || |||||| || |||||||| Sbjct 94921 GTGAAGATGTATCGAGGGCTGGCCGAGTCCTTGCCTCCATGCAGCCGGGTGCCAAACTGG 94980 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCA 152140 || |||| || ||||| ||||||||| |||||| || ||||| |||| Sbjct 94981 CCCAGCGGCTGCAGCAGGTTCAGGTTGTTGCTGCCCACAAAGTTCTGCGCCA 95032 >seq896 Length=134646 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||||||||| |||| || || || |||| || |||||||| || || | ||||||| Sbjct 20594 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 20653 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 ||||| ||||||| | || || ||| ||||||||| ||||| || |||||||| Sbjct 20654 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 20713 Query 74892 ACAAGGCG 74899 || | ||| Sbjct 20714 ACCACGCG 20721 >seq18799 Length=8091 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 ||||| |||||| |||| |||||||| ||| ||||| ||||||||||| ||||| ||| Sbjct 715 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 656 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427 |||| |||| ||||||||| | | || || ||||| Sbjct 655 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGG 618 >seq5979 Length=32993 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 ||||| |||||| |||| |||||||| ||| ||||| ||||||||||| ||||| ||| Sbjct 1301 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 1360 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427 |||| |||| ||||||||| | | || || ||||| Sbjct 1361 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGG 1398 >seq14568 Length=18141 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522 || || || || ||||| ||||| |||||||||||||| |||| |||||||||||||| Sbjct 6073 TACTCCCCCACACGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGGGAGATGTTCTCCATG 6132 Query 74523 CAGTCGAAAGGGTTCT 74538 ||||||| ||||||| Sbjct 6133 AAGTCGAAGGGGTTCT 6148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545001553652000