Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1873 95.1 1e-14
seq896 91.5 2e-13
seq18799 87.8 2e-12
seq5979 87.8 2e-12
seq14568 84.2 2e-11
>seq1873
Length=117512
Score = 95.1 bits (104), Expect = 1e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
|||||||||||||| | |||||||| |||||||| || |||||| || ||||||||
Sbjct 94921 GTGAAGATGTATCGAGGGCTGGCCGAGTCCTTGCCTCCATGCAGCCGGGTGCCAAACTGG 94980
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCA 152140
|| |||| || ||||| ||||||||| |||||| || ||||| ||||
Sbjct 94981 CCCAGCGGCTGCAGCAGGTTCAGGTTGTTGCTGCCCACAAAGTTCTGCGCCA 95032
>seq896
Length=134646
Score = 91.5 bits (100), Expect = 2e-13
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831
||||||||||| |||| || || || |||| || |||||||| || || | |||||||
Sbjct 20594 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 20653
Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891
||||| ||||||| | || || ||| ||||||||| ||||| || ||||||||
Sbjct 20654 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 20713
Query 74892 ACAAGGCG 74899
|| | |||
Sbjct 20714 ACCACGCG 20721
>seq18799
Length=8091
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
||||| |||||| |||| |||||||| ||| ||||| ||||||||||| ||||| |||
Sbjct 715 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 656
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427
|||| |||| ||||||||| | | || || |||||
Sbjct 655 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGG 618
>seq5979
Length=32993
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
||||| |||||| |||| |||||||| ||| ||||| ||||||||||| ||||| |||
Sbjct 1301 AGCTGTTTCCTGCTGGCCATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTGAAG 1360
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG 53427
|||| |||| ||||||||| | | || || |||||
Sbjct 1361 CAGTGCGCCCTCATCTCCAAATCCGCCGGGGGCATCGG 1398
>seq14568
Length=18141
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || || || ||||| ||||| |||||||||||||| |||| ||||||||||||||
Sbjct 6073 TACTCCCCCACACGCTTCTCAAAGAAGTTGGTCTTCCCCTCCAGGGAGATGTTCTCCATG 6132
Query 74523 CAGTCGAAAGGGTTCT 74538
||||||| |||||||
Sbjct 6133 AAGTCGAAGGGGTTCT 6148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545001553652000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |