Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq1017 109 7e-19 seq2397 105 8e-18 >seq1017 Length=122867 Score = 109 bits (120), Expect = 7e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 32669 AGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCAT 32728 ||| ||||||| || | | | ||||| ||| | || || ||||| || | |||||||| Sbjct 118675 AGCATTGTGGTGGTACTATGTGTCTAAGGGTGTGGAGTACCTAGACACAGTGTTCTTCAT 118616 Query 32729 AATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTT 32788 || | ||||| |||||||| || ||||| ||||| || |||||||| | |||||||| Sbjct 118615 CCTGCGTAAGAAGTTTAACCAGGTCAGCTTCTTGCATGTCTACCACCACTGCACCATGTT 118556 Query 32789 TACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 || | | ||||| || || || ||| | |||||||||||| Sbjct 118555 CACCCTCTGGTGGATCGGCATCAAGTGGGTGGCAGGAGGACAG 118513 >seq2397 Length=69965 Score = 105 bits (116), Expect = 8e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 32661 ATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATT 32720 ||||| ||| |||||| || | ||||| |||||| | || || || || || || Sbjct 51484 ATAGCGGCAGCTCTGTGGTGGTACTACATCTCAAAAGGTGTGGAGTACCTGGACACGGTT 51425 Query 32721 TTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTT 32780 |||||||| || | ||||| || ||||| || ||||| |||| || |||||||| | | Sbjct 51424 TTCTTCATCCTGCGGAAGAAGTTCAACCAGGTCAGCTTCCTGCATGTGTACCACCACTGT 51365 Query 32781 ACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 |||||||| | | | ||||| ||||| || ||| | |||||||||||| Sbjct 51364 ACCATGTTCATCCTCTGGTGGATCGGGATCAAGTGGGTCGCAGGAGGACAG 51314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 600739878097600