Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq8027 392 4e-104 seq385 271 1e-67 seq12465 131 2e-25 seq2655 98.7 1e-15 >seq8027 Length=58046 Score = 392 bits (434), Expect = 4e-104 Identities = 652/934 (70%), Gaps = 17/934 (2%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| || |||| | |||| |||||||| ||||| || ||| ||||||||||| Sbjct 51295 CCGCTGAGCCGCGAGGAGGCCCAGTTCCCCATCGCGTACTCCATTGTGGTCCACCACAAG 51354 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||| ||| |||||| | || ||||||||| ||||||| || |||||||| ||||||||| Sbjct 51355 ATCCAGACCTTCGAGAGGCTGCTGAGGGCCGTCTACGCGCCCCAGAACCTGTACTGCGTC 51414 Query 13791 CACGTGGACTCCAAGTCCGGCGACGAG-TTCATCCGGGGCGTCTCGGCC-ATCGCCAGGT 13848 ||||||||| |||| | | || ||| ||| || || ||| |||| |||||| | Sbjct 51415 CACGTGGACAGCAAGGC-GCCGTCGACCTTCCTCTTGGCCGTG-CGGCAGATCGCCTCCT 51472 Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908 ||||| ||||| | | ||| ||||||| | ||||||||||| | |||||| Sbjct 51473 GCTTCGACAACGTCTTCATCGCCAGCCGGCTGGAGAGCGTGGTGTACGCCAGCTGGAGCA 51532 Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGT 13968 | |||||||||||||||| ||||||| |||||| || | | || | ||||||| Sbjct 51533 GGGTGCAGGCCGACCTCAACTGCATGGGCGACCTGTACAACCACAGCGCCCCCTGGAGGT 51592 Query 13969 ACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGG 14028 || | ||||||||||||| |||||||||||| ||||||||||||||||| ||||| Sbjct 51593 ACTTCGTCAACCTGTGCGGCCAGGACTTCCCGCTGAAGACCAACCTGGAGATGGTGCGCC 51652 Query 14029 CGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGC 14088 ||||| ||||||| || |||||| |||||||| ||| | ||| | |||| Sbjct 51653 AGCTGAGGGCCCTGCAGGGGAAGAACAGCCTGGAGACGGAGAAGACGCCGCCCTCCAAGG 51712 Query 14089 TGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGT--GGTGGTCAACACCGG 14146 | || | |||| | ||| |||||| ||||| | | || || || | Sbjct 51713 AGGCGCGGTGGAAGAAGCGCTACGAGGTGGCGGACGGCGCCATCCGGAGG-----ACGGA 51767 Query 14147 CAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGC 14206 | | ||||||||||||| || || || || || || ||||| || ||| | | Sbjct 51768 GAAGGACAAGGCCCCGCCTCCCGTCGAGACGCCGATGTTCGCGGGCGGGGCCTACGTCGT 51827 Query 14207 GGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGCTCATGCA 14266 ||||| ||||| |||||| |||||| || ||||| || | | ||| ||| | Sbjct 51828 GGTCAGCCGGGCGTTCGTCCGCTTCGTGCTGGAGGACCCCAGGGCGCGGCGGCTGATGGA 51887 Query 14267 CTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTA 14326 ||| | ||||| ||||||||||||||| ||||||||| || ||||||| ||| Sbjct 51888 GTGGGCCAAGGACGGCTACAGCCCCGACGAGTTCCTGTGGGCGACGCTGCAGAGGATGCC 51947 Query 14327 CGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAA 14386 ||| ||||||| | | ||| || | |||||| ||||| | ||| Sbjct 51948 CGGCGTGCCCGGGTCGCTTCCCAGCAACCACCGCTACGACGTGACGGACGTCAACGCCCT 52007 Query 14387 GGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCC 14446 | | || | || |||||||| |||| ||||||| ||| || ||| ||||||| Sbjct 52008 CGCCCGGCTGGTGAAGTGGCAGTACTTTGAGGGGGCGGAGGCGAAGGGCGCCATGTACCC 52067 Query 14447 GCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTG 14506 ||| ||| ||| |||||| | |||||||| ||| ||| ||||||| || || Sbjct 52068 GCCCTGCAGGGGCCACCACGTGCGGTCCATCTGCGTCTACGGCGTCGGCGACCTGGGCTG 52127 Query 14507 ---GCTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACGAGTT 14563 |||| ||| ||||| || |||||||||||||||||| ||| | ||| | Sbjct 52128 GATGCTGCAGA---AGCCGCAGCTCTTCGCCAACAAGTTCGACACCGACGCCGACCCCAT 52184 Query 14564 CGCCGTGCGCTGTCTGGACGAGGACGTGCGCACC 14597 |||||||| ||| ||||| || | |||| ||| Sbjct 52185 CGCCGTGCACTGCCTGGAGAAGTATTTGCGGACC 52218 >seq385 Length=209995 Score = 271 bits (300), Expect = 1e-67 Identities = 595/879 (68%), Gaps = 22/879 (3%) Strand=Plus/Minus Query 13676 GAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAGATCGA 13735 |||| ||| ||| | ||||| |||||||| ||||| || ||| ||||| | || ||||| Sbjct 167604 GAGCGCGGAGGAGATGGAGTTCCCCATCGCGTACTCCATGGTGGTCCACGAGAAAATCGA 167545 Query 13736 GATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGT 13795 |||||||||| | |||||| |||| || |||| || || ||| | |||||||| ||||| Sbjct 167544 GATGTTCGAGAGGCTCCTGCGGGCTATATACGTGCCCCACAACGTGTACTGCGTGCACGT 167485 Query 13796 GGACTCCAAGTCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGTGCTTCCC 13855 |||| ||||||| || | |||| | | |||| || ||||| | ||| | || Sbjct 167484 GGACCGCAAGTCCCCAGAGGCCTTCAGGCTTGCCGTCCAGGGCATCGTCTCCTGCCTGCC 167425 Query 13856 TAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCA 13915 |||||| ||||| | ||||| | |||| | |||| |||||| || ||||| Sbjct 167424 CAACGTGTTTGTGGCCAGCAGGCTGGAGAGCGTGATATACGCGTCCTGGTCCCGGGTGCA 167365 Query 13916 GGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAGGTACCTG 13973 || ||||||| ||||||| |||||| || | || || ||| |||| |||||||| Sbjct 167364 AGCGGACCTCAACTGCATGGAGGACCTCATGAAG--TCGCCGGTCCGGTGGCGGTACCTG 167307 Query 13974 CTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTG 14033 |||||| ||||| | |||||||| |||| || ||| |||||||||||| || || Sbjct 167306 CTCAACACCTGCGGCACCGACTTCCCCATCAAAACGAACGCGGAGATCGTGCGAGCTCTC 167247 Query 14034 AAGGCCCTGGGCGGCAAGAACGCCCTGGAGAGCGAGGGCATGCCCAACCACAAGCTGCAC 14093 || || ||||| |||| | ||||| ||| | | | |||| ||||| | Sbjct 167246 AAACAGCTCCACGGCAGGAACAGCATGGAGTCCGAAGAGACGAACAACTACAAGAAAGGC 167187 Query 14094 CGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGT--GGTCAACACCGGCAGGA 14151 ||| | | | | ||| ||| | || || |||| | || |||| | || Sbjct 167186 CGCTGGATGTACCGCCACAACGTGAC--GC-ACGCCGTGATCAGGACAAC-----CCTGA 167135 Query 14152 ACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTTTGCGGTCA 14211 | |||| || || || |||| | ||| || || | || ||||| ||||| | ||||| Sbjct 167134 AGAAGGATCCTCCCCCCATCAGCACCCCTATGTTCTCTGGGAACGCCTACTTCGTGGTCA 167075 Query 14212 CCCGGGAGTTCGTG-GACTTCGTCCTCAAGGACGAGCCGGT--GGCCCTGCTCATGCACT 14268 |||||||||| ||| | | | || || | | || ||| || || ||||| | | Sbjct 167074 CCCGGGAGTTTGTGAGGCACCTGTCTGAAAG-CCAGGAGGTGCGGTCC--CTCATCGAGT 167018 Query 14269 GGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTAC- 14327 || |||| || |||||||| ||||| ||||||||||||||| ||||||||||| | Sbjct 167017 GGGAGAAGGATACCTACAGCCCTGACGAACACCTGTGGGCCACCCTGCAGAGAATGCCCT 166958 Query 14328 GGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAG 14387 | | || | |||||| || ||||||| | ||||||||| ||||| Sbjct 166957 CCGTCCCCGGCTCCTATCCCC-CCAACAGCAAGTACCAGCAGTCGGACATGGAGGCCATC 166899 Query 14388 GTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCG 14447 | | | | || |||||| |||| || ||||| | | ||| || || | |||||| Sbjct 166898 GCCCGCCTGGTGAAGTGGAGCTACCTGGAAGGGGACGTGAGGAAGGGTGCGCCCTACCCG 166839 Query 14448 CCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG 14507 || ||| ||| | ||| ||| | ||| ||| ||| |||| ||| | ||| Sbjct 166838 CCCTGCACCGGGACTCACCGGAGAGCCGTGTGCGTCTACGGCACCGGGGACCTCCGCTGG 166779 Query 14508 CTGAAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 || ||| | ||||| |||||||||||||| ||| Sbjct 166778 ATGCTCAGCCAGCATCACCTTTTCGCCAACAAGTTTGAC 166740 >seq12465 Length=14933 Score = 131 bits (144), Expect = 2e-25 Identities = 256/368 (70%), Gaps = 18/368 (5%) Strand=Plus/Minus Query 13668 AGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCAC 13727 || |||||||||| || || | |||| ||| | |||| | ||| ||| | ||| Sbjct 11222 AGCCCCCTGAGCCGCGAGGAAGAGGAGTACCCCCTGGCCTTC---ATCATGACCATACAC 11166 Query 13728 AAGA---TCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTAC 13784 ||| | |||||||||| ||| || || | ||| | ||||| ||||||||| ||||| Sbjct 11165 AAGGAGCTGGAGATGTTCGCGCGGCTGCTCCGCGCCGTGTACGCGCCGCAGAACGTCTAC 11106 Query 13785 TGCGTCCACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGG-GGC-GTCTCGGCCATCG 13842 ||||||||||||||| ||||| ||| | | | | | | || ||| || | | | Sbjct 11105 TGCGTCCACGTGGACGCCAAG-GCGGAGCCCTGGT-ACCGGGCGGCGGTGGAGAGGCTGG 11048 Query 13843 CCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCA-CGACGTGGTG---TACGGC 13898 || | |||||||| ||||| ||||||| |||| || ||| |||| |||| | Sbjct 11047 CCGGCTGCTTCCCCAACGTCTTCCTGGCC--TCGGC--CAGCGAGAGGGTGACATACGCC 10992 Query 13899 TCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTC 13958 || || | ||||||||| ||| ||||||| |||||||| | || || || Sbjct 10991 GGCTTCTCCCGGCTCCAGGCCGACATCAACTGCATGCGGGACCTGGCCAGGTCGCCGGTG 10932 Query 13959 AAGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAG 14018 |||||| | |||||||||| ||||| ||||||||| ||| || |||||||||| Sbjct 10931 GCCTGGAGGAAGGTGCTCAACCTCTGCGGCCAGGACTTCCCCATCATGAGCAACCTGGAG 10872 Query 14019 ATCGTGCG 14026 | ||||| Sbjct 10871 CTGGTGCG 10864 >seq2655 Length=104255 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 13915 AGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGC 13974 |||||||||| | |||| |||||||||| | ||||| |||||||||| |||| | Sbjct 89640 AGGCCGACCTTAACTGCCTGTCGGACCTCCTCAAGTCCCCGGTCAAGTGGAAGTACGTTA 89581 Query 13975 TCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGA 14034 ||||||||||||| ||||||||| |||| | ||||| | ||| | ||| || ||||| Sbjct 89580 TCAACCTGTGCGGCCAGGACTTCCCCCTCAGGTCCAACTTTGAGCTGGTGTCGGAGCTGA 89521 Query 14035 AG 14036 || Sbjct 89520 AG 89519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656073447142400