Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1314 104 1e-17
>seq1314
Length=105107
Score = 104 bits (114), Expect = 1e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||||||||||| |||| |||||||| |||||| || ||||| || || ||
Sbjct 44291 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 44350
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 44351 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44410
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| |||| || | || || | ||| ||||| | ||||||
Sbjct 44411 ATGCCTTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCAC 44469
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||| || || || || || | |||||||| || |||||||||
Sbjct 44470 CTCCAGGGTAATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCATG 44518
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||||||||||| |||| |||||||| |||||| || ||||| || || ||
Sbjct 43835 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 43894
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 43895 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 43954
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| |||| || | || || | ||| ||||| | ||||||
Sbjct 43955 ATGCCTTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCAC 44013
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| || || || || || | || |||||||| ||||||||
Sbjct 44014 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44061
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||||||||||| |||| |||||||| |||||| || ||||| || || ||
Sbjct 44063 CCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 44122
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 44123 AGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGA 44182
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || |||||||| |||| || | || || | ||| ||||| | ||||||
Sbjct 44183 ATGCCTTCCTTGTCCTGGATC-TTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCAC 44241
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| ||| || || || || || | || |||||||| ||||||||
Sbjct 44242 CTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 44289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313487808791420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |