Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq246 159 3e-34 >seq246 Length=269734 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || || ||||||||||||||||| || || || || |||||||| ||||| ||||||||| Sbjct 46580 TGGGCAATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACACCTAACCCC 46639 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||||| || || || || |||||||||||||||||||||| || ||||| ||| Sbjct 46640 ATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACATAGAACTGG 46699 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || |||| |||||| ||||| || |||||||| || || || Sbjct 46700 CACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTC 46740 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 || || || |||||||| || ||||| |||||| |||| ||||| ||||| || || Sbjct 46740 GACCTGCCCCTGATGGCCCTGCCCCCCTGCCACGCCCTGTGCCAGTTCTATGTGTGTGAT 46681 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 |||||||||||||||||||| || || || || ||||||||||||||||| ||||| ||| Sbjct 46680 GGGGAGCTGTCCTGCCAGCTGTACCAGCGGTCCGGAGACATGGGGTTAGGTGTGCCCTTC 46621 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || || || ||||||||||||||||| || || Sbjct 46620 AACATCGCCAGCTATGCCCTGCTCACGTACATGATTGCCCA 46580 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||||||||||||||| ||||| || ||||||||||| || |||||| Sbjct 47378 TATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTCCCCTTCCTCC 47437 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | || || | |||||||| ||| || || || || | || ||||| || ||| Sbjct 47438 CTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTC 47497 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCC 7057 || || ||| ||||| |||| || || | |||| Sbjct 47498 ACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCCC 47536 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 34288 GGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGG 34347 |||| | || || |||| ||||| ||| || ||||| || ||||| || | || Sbjct 47536 GGGGTCAACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGATGCAAATGG 47477 Query 34348 GTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCC 34407 || || || ||| |||||||| | || || | ||||||| || ||||||||||| Sbjct 47476 ATCCCGTGATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGACTTGGGCCC 47417 Query 34408 GGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||| |||||||||||||||||||| || || || Sbjct 47416 TGTTTACGGTTTCCAGTGGAGACACTTTGGTGCTGAATA 47378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446448394132800