Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1314 147 5e-30
seq323740 109 1e-18
>seq1314
Length=105107
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||| | |||||| ||||||||||| || || || |||| ||||| |||| || || |
Sbjct 44299 AAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 44358
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| |||||||| ||||| ||||| || | || ||||| || ||||| |||||
Sbjct 44359 GCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTC 44418
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
|||||| |||||||| ||| ||| || |||||||| || ||||| || | ||
Sbjct 44419 CTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGT 44478
Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| |||||||| |||| ||||| | ||| | |||||
Sbjct 44479 AATGGTCTTGCCAGTCAGGGTTTTCACGAAGATCTGCAT 44517
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||| | |||||| ||||||||||| || || || |||| ||||| |||| || || |
Sbjct 43843 AAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 43902
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| |||||||| ||||| ||||| || | || ||||| || ||||| |||||
Sbjct 43903 GCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTC 43962
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
|||||| |||||||| ||| ||| || |||||||| || ||||| || | ||
Sbjct 43963 CTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGT 44022
Query 225675 GATCGTCTTGCCCGTCA 225691
||| |||||||| ||||
Sbjct 44023 GATGGTCTTGCCAGTCA 44039
Score = 143 bits (158), Expect = 6e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 225495 AAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCT 225554
||| | |||||| ||||||||||| || || || |||| ||||| |||| || || |
Sbjct 44071 AAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCG 44130
Query 225555 CCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTC 225614
|||||||| |||||||| ||||| ||||| || | || ||||| || ||||| |||||
Sbjct 44131 GCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTC 44190
Query 225615 CTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674
|||||| |||||||| ||| ||| || |||||||| || ||||| || | ||
Sbjct 44191 CTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGT 44250
Query 225675 GATCGTCTTGCCCGTCA 225691
||| |||||||| ||||
Sbjct 44251 GATGGTCTTGCCAGTCA 44267
>seq323740
Length=16702
Score = 109 bits (120), Expect = 1e-18
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| ||||||| || || | || |||||||||||||| |||||||||||| | || ||
Sbjct 16386 CCAAATTTACAATGTCATCGTCACAGCGCATGCCTTTGTAATGATTTTCTTTATAGTAAT 16327
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| || || || || || || || || || |||| || |||||||| || || || ||
Sbjct 16326 ACCAGTAATAATTGGAGGATTTGGCAACTGGCTCGTGCCGTTAATGATCGGCGCCCCAGA 16267
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCT 7730
|| || ||||| | | ||||| ||||| || ||| | |||| || || || ||||
Sbjct 16266 CATAGCATTTCCCCGAATAAACAACATAAGCTTCTGACTTTTACCACCATCATTCCTTCT 16207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1187584677475560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |