Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq246 156 3e-33 seq1813 91.5 1e-13 >seq246 Length=269734 Score = 156 bits (172), Expect = 3e-33 Identities = 133/164 (81%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 ||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||| Sbjct 46568 AGCCCAGTGATGTGGGCAATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 46627 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || | ||||||||| || |||| |||||| |||||||| || ||||| || || | | Sbjct 46628 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 46687 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAG 29877 || || ||||| |||| ||| ||||| || || |||||||| || Sbjct 46688 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAG 46731 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || ||||||||||| ||||| || || |||| ||| || || ||||||| || Sbjct 47390 AAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTCCCCTTCCTCCCTGTTAGTAAAT 47449 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||||||||||| || | ||| || || || ||||| || || || || ||||| Sbjct 47450 CCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATCCCAAATTTTCACACCTTTCTCC 47509 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || ||||||||||| ||||| ||||| Sbjct 47510 GACAGCTCTTTGGAATTTGTTGACCC 47535 >seq1813 Length=138402 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 ||| |||||||| || | || | ||||| | |||| ||||| ||| ||| || || || Sbjct 83101 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 83160 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 |||||| ||||| | |||||| ||||| ||||||||||||||| Sbjct 83161 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 83203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404560650093640