Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq246 147 2e-30 >seq246 Length=269734 Score = 147 bits (162), Expect = 2e-30 Identities = 137/174 (79%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 ||||| |||| ||| || |||||||||||||| || | |||||||||||||| ||||| Sbjct 46568 AGCCCAGTGATGTGGGCAATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 46627 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || | ||||||||| || |||| |||||| ||||| || || ||||| ||||| | Sbjct 46628 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 46687 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 27381 || || ||||| || | ||||||||| || || || ||||| ||| || |||| Sbjct 46688 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 46741 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 |||||| |||| || || || || || ||||| ||||| ||||| || || |||| ||| Sbjct 47368 CATGTCTTTGTATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAGTC 47427 Query 27549 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 27608 || || ||||||| || || |||||||||||||| || | ||| || || || || Sbjct 47428 CCCTTCCTCCCTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATC 47487 Query 27609 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 27656 ||| || || || || ||||| || ||||||||||| ||||| ||||| Sbjct 47488 CCAAATTTTCACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCC 47535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368049279319940