Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18]
323,740 sequences; 1,151,137,423 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq11470 129 1e-24
seq1314 123 5e-23
seq17182 93.3 9e-14
seq5296 93.3 9e-14
seq3804 93.3 9e-14
seq25747 89.7 1e-12
seq17175 89.7 1e-12
seq10576 89.7 1e-12
seq3405 89.7 1e-12
seq810 89.7 1e-12
>seq11470
Length=16648
Score = 129 bits (142), Expect = 1e-24
Identities = 143/191 (75%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || ||||||||||| || || || || |||||||||
Sbjct 14207 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 14148
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | || ||||| ||||| ||||| ||||| |||||||| || || ||| |
Sbjct 14147 ATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTC 14088
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| | || || || || ||||| ||||| || || | ||||| |||
Sbjct 14087 TCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACG 14028
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 14027 AAGATCTGCAT 14017
Score = 87.8 bits (96), Expect = 4e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022
|||||||||| | || ||||| ||||| ||||| ||||| |||||||| || ||
Sbjct 13705 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 13646
Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082
||| | || || ||||| | || || || || ||||| ||||| || |||| |||
Sbjct 13645 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATAGTCTTGCCAGTCAGTGTC 13586
Query 283083 TTAACGAATATCTGCATTTTCAT 283105
|| || || ||||||||||| ||
Sbjct 13585 TTGACAAAGATCTGCATTTTGAT 13563
>seq1314
Length=105107
Score = 123 bits (136), Expect = 5e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || ||||||||||| || || || || || ||||||
Sbjct 43871 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAG 43930
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | || |||||| ||||| || |||||||| |||||||| || || || |
Sbjct 43931 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 43990
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| | || || || || ||||| ||||| || |||| ||||| ||
Sbjct 43991 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 44050
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 44051 AAGATCTGCAT 44061
Score = 123 bits (136), Expect = 5e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || ||||||||||| || || || || || ||||||
Sbjct 44099 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAG 44158
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | || |||||| ||||| || |||||||| |||||||| || || || |
Sbjct 44159 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 44218
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| | || || || || ||||| ||||| || |||| ||||| ||
Sbjct 44219 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 44278
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 44279 AAGATCTGCAT 44289
Score = 120 bits (132), Expect = 6e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || ||||||||||| || || || || || ||||||
Sbjct 44327 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAG 44386
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|||| | || |||||| ||||| || |||||||| |||||||| || || || |
Sbjct 44387 ATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 44446
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| | || || || || || || ||||| || |||| || || |||
Sbjct 44447 TCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTTTTCACG 44506
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 44507 AAGATCTGCAT 44517
>seq17182
Length=9430
Score = 93.3 bits (102), Expect = 9e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 7562 TTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 7620
Score = 93.3 bits (102), Expect = 9e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 7968 TTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 8026
>seq5296
Length=36910
Score = 93.3 bits (102), Expect = 9e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 26689 TTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 26747
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 26561 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 26503
>seq3804
Length=86553
Score = 93.3 bits (102), Expect = 9e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 44181 TTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 44239
>seq25747
Length=4424
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
|||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 2258 TTAGTATAGTGGCCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 2316
>seq17175
Length=9438
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 1551 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 1493
>seq10576
Length=18253
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 11719 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 11661
>seq3405
Length=64678
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 60629 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 60687
>seq810
Length=298147
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 284094 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 284152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1042397410845960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |