Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20japonica_20[genbank_20GCA_5F000470695.1_202014-03-18] 323,740 sequences; 1,151,137,423 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq53 158 2e-33 seq232 156 6e-33 seq370 93.3 6e-14 >seq53 Length=402108 Score = 158 bits (174), Expect = 2e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 8351 TTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAG 8410 ||||||||| |||| || || | ||||| |||||||| ||| |||||||| ||||||| Sbjct 394129 TTGACGATCTCGAATCCAACCTTCCCGCCAAAGGTGCTTGGCATCCAGTACTCCGGGGAA 394188 Query 8411 CAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTC 8470 |||||| || |||| || ||||| |||||| | || || |||| || | ||| || Sbjct 394189 CAGATGGGATTACCCATCAGCCCTTTCAGGGAGTAAGGGGCTCCCATTTCCACCATGGTC 394248 Query 8471 TCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACA 8530 || || |||| || ||||| | |||||| |||||||||| |||| |||||||||||| Sbjct 394249 TCTCCAAAGACAGCATTGGGCCTGGGCTTCTCCACCAAGAGCCCGGGGTACAGCTCCACT 394308 Query 8531 GCCTCGACGTCTCCGTA 8547 || || | ||||||||| Sbjct 394309 GCGTCAATGTCTCCGTA 394325 Score = 120 bits (132), Expect = 4e-22 Identities = 168/232 (72%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 9232 TCCCCGATAATGATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGT 9291 || || || | |||||| || |||||||| || || |||||||| ||| || || || Sbjct 395598 TCACCAATGAGGATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGC 395657 Query 9292 TCTTGTTTCAGAACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATC 9351 || ||||| | ||||| || | |||||| || | |||||||| |||||||||||| Sbjct 395658 TCGCTCTTCAGGATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATC 395717 Query 9352 ATGAGCCCAGGTACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATG-TTTTCGGG 9410 ||||| || || |||||||| || ||||| || || || || || | || | || || Sbjct 395718 ATGAGGCCCGGCACCAGGCCGAAGGCCTCGTGCCCCACGGCAAG-CTTGTGCTCCTCAGG 395776 Query 9411 CACTTCGGGAGGATAGATCATGTGCACCTGGACGTCTTTGACCG-AGGGGGG 9461 || | ||| || ||| ||| | |||||| || | || |||| ||||||| Sbjct 395777 GACATGGGGTGGGTAGTGCATCTCCACCTGCACTTGCTTCACCGTAGGGGGG 395828 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 9650 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAAA 9709 ||||| ||||| ||||| |||| ||||||||||| || | || || | | ||| Sbjct 396582 CTTACGCCATGACCCAGGGCTTTGGTGAAGGCCGGTCCCTTCTTCATGTCGGATTTGAAA 396641 Query 9710 AACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATCG 9769 ||||| || ||||| ||||| |||| ||||||||||| | ||| | || || ||||| Sbjct 396642 AACTGATGGGTGAAGTGTTGAGCAAAGAAGGCAAACATCATATTGCTTCCTTGAGGATCA 396701 Query 9770 GGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAA 9806 ||| ||||| | ||| | || ||| ||||||| Sbjct 396702 GGAATGAAGCGCTTCCTCAACAGCAGTTTCTCCACAA 396738 >seq232 Length=316446 Score = 156 bits (172), Expect = 6e-33 Identities = 179/241 (74%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303 ||||| || ||||||||||| || |||| ||| ||| || || || |||||||| Sbjct 153087 ATGAGGCGTGTGGTCTGGAAGAGGCGCTCATCATCCCAGGTGGGGTGCTCCTGTTTCAGC 153146 Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363 || || || |||| |||||| || | |||||||| ||||| ||||||||||| || || Sbjct 153147 ACGTCACAGACCCGGTTGTGCTCACGAAGCCAGATGGTGGCATACATCATGAGTCCTGGA 153206 Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423 ||||| ||||| || || || || ||||| | || | ||||| || | ||||||| Sbjct 153207 ACCAGCCCAAATGCTTCATGGCCCACAGCAAAGCGGTGCTCCTCGGGGACATGGGGAGGA 153266 Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483 ||| ||||| ||||||||| || || || || || ||||||| ||| || || | || | Sbjct 153267 TAGTGCATGTCCACCTGGACCTCCTTCACTGAAGGAGGATACACTTCCCCATCCACCACC 153326 Query 9484 T 9484 | Sbjct 153327 T 153327 Score = 84.2 bits (92), Expect = 3e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 9926 GGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCGTAATAGGAGAGATTGGAG 9985 || ||||| ||||| | ||| || || ||||| | | || |||||||||||| || || Sbjct 154405 GGTGTTGGGCAATCTTCAGGTACAGGCGGTAGGGTTCGTGTGTAATAGGAGAGGTTTGAA 154464 Query 9986 AAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATGGGAGGGCTGTCAATCAAA 10045 | |||||||||||| ||| | || || | ||||| | ||||||||||| |||||| Sbjct 154465 TACGCTTCCCAGCTTTTGTAACCATAATCTGAATTGTAGGTAGGAGGGCTGTCGATCAAA 154524 Query 10046 T 10046 | Sbjct 154525 T 154525 >seq370 Length=220803 Score = 93.3 bits (102), Expect = 6e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 8361 CGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGT 8420 |||||||||| | || || || ||||||||||||||||| || | |||||| | | Sbjct 20799 CGAACCCCACCTGCCCACCAAACGTGCTGGGCTTCCAGTAGTGTGGTGCACAGATGGCAT 20740 Query 8421 TCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGA 8480 | ||||||| ||||| || ||||| ||||| |||| ||| | ||||||| ||| || | Sbjct 20739 TTCCCATGAGTCCTTTCAGAGAGAAGGGAGCACCCATCTCCACCATGCTCTGACCAAATA 20680 Query 8481 TGGC 8484 |||| Sbjct 20679 TGGC 20676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 713975778809600