Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3116 100 3e-16 seq36092 86.0 6e-12 >seq3116 Length=119845 Score = 100 bits (110), Expect = 3e-16 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || |||||||| || ||||||||||| || |||||||||||||||||||| ||||| Sbjct 116166 ATGTAGGTATCGATCAGCAGGCTGTACATCTCAGAGTGTATGTTCTCCATGGCGATCTGG 116225 Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318 || ||||| || || |||||||||| Sbjct 116226 AAACCGTAGAAACAGCGGGCTTCCG 116250 Score = 95.1 bits (104), Expect = 1e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || ||||||||||| || |||||||||||||||||||| ||||| Sbjct 106174 ATGTAGGTGTCGATCAGCAGGCTGTACATCTCAGAGTGTATGTTCTCCATGGCGATCTGG 106233 Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318 || ||||| || || |||||||||| Sbjct 106234 AAGCCGTAGAAACAGCGGGCTTCCG 106258 >seq36092 Length=2431 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || || || || |||||||||||||||||||| ||||| || |||||||| | Sbjct 588 GGTCTTTGATGTAGGTGTCAATGAGTAGGCTGTACATTTCTGAGTGGATATTCTCCATCG 529 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 | || || |||||||| || || || ||||| | | ||| || ||| Sbjct 528 CGATTTGGAATCCGTAGAAACACCGTGCTTCTGTCACTTGGACCTCC 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517033171632120