Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3116 100 3e-16
seq36092 86.0 6e-12
>seq3116
Length=119845
Score = 100 bits (110), Expect = 3e-16
Identities = 73/85 (86%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || |||||||| || ||||||||||| || |||||||||||||||||||| |||||
Sbjct 116166 ATGTAGGTATCGATCAGCAGGCTGTACATCTCAGAGTGTATGTTCTCCATGGCGATCTGG 116225
Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318
|| ||||| || || ||||||||||
Sbjct 116226 AAACCGTAGAAACAGCGGGCTTCCG 116250
Score = 95.1 bits (104), Expect = 1e-14
Identities = 72/85 (85%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || ||||| || ||||||||||| || |||||||||||||||||||| |||||
Sbjct 106174 ATGTAGGTGTCGATCAGCAGGCTGTACATCTCAGAGTGTATGTTCTCCATGGCGATCTGG 106233
Query 17294 AATCCGTAAAAGCATCGGGCTTCCG 17318
|| ||||| || || ||||||||||
Sbjct 106234 AAGCCGTAGAAACAGCGGGCTTCCG 106258
>seq36092
Length=2431
Score = 86.0 bits (94), Expect = 6e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285
|||| | || || || || |||||||||||||||||||| ||||| || |||||||| |
Sbjct 588 GGTCTTTGATGTAGGTGTCAATGAGTAGGCTGTACATTTCTGAGTGGATATTCTCCATCG 529
Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332
| || || |||||||| || || || ||||| | | ||| || |||
Sbjct 528 CGATTTGGAATCCGTAGAAACACCGTGCTTCTGTCACTTGGACCTCC 482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517033171632120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |