Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq527 113 5e-20 seq501 105 8e-18 seq138 87.8 2e-12 >seq527 Length=70141 Score = 113 bits (124), Expect = 5e-20 Identities = 169/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Plus Query 50441 TCTATCTACAACTTCGCTGTGCGTATGCTCGTGTACATGTTTCCAGAGCTCTTTACTGCG 50500 || ||| ||||||||| ||| |||| ||| ||||| || |||||||| || Sbjct 41654 TCCATCGGCAACTTCGCCTCGCGCCTGCTGGTGCTGATGTTCCCCGAGCTCTTCACCTAC 41713 Query 50501 GAGAACCTGCACACGCACTTCAACTGCTACGGCTCCATGGGCAAGC-GCAGGCTCGACCC 50559 |||||| || || | ||| ||||||| |||||| |||||||| |||| || ||||| Sbjct 41714 GAGAACGCGCGCAAGAACTACAACTGCAGCGGCTCGCTGGGCAAGAAGCAG-CTGGACCC 41772 Query 50560 GCTACGCCTGCGCTTGCTCCGGCACTATGTGCAGTTGCTGCACCCG-GCGGCGCGCAACG 50618 | || || | || |||| ||||| |||||| ||||| ||||| ||| | | |||| Sbjct 41773 CGTGCGGGTGAACCTGATCCGCCACTACGTGCAGCTGCTGTACCCGCGCGCCAAG-AACG 41831 Query 50619 AGCGCGTGTGGATCACAAAGTTCCTGGCGTGCCTGGACGAGCGCTGCCGGCGCCG 50673 | ||||| |||| ||||| ||| |||||||||||||||||||| || Sbjct 41832 ACCGCGTCTGGACGCTGGAGTTCGTGGGCAAGCTGGACGAGCGCTGCCGGCGACG 41886 >seq501 Length=449620 Score = 105 bits (116), Expect = 8e-18 Identities = 173/242 (71%), Gaps = 8/242 (3%) Strand=Plus/Minus Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203 ||||||||||| ||||| || ||||| || | ||| ||||| |||| ||| || | Sbjct 124953 AACTTCTCGAAATTCCAAGCGACGTCATTCCTGCAGACTGGGCTCCAGATGATGCACTTG 124894 Query 83204 GGGTCGCTCA-CGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGC-CTCTCGTAGGA 83261 |||||| ||| | || || | ||||||||||||| ||| || |||| | |||| Sbjct 124893 GGGTCGGTCATCAAGGATG-TGGTGTCGTCGCTAGGGAACGGAAGTTTACTCTTG-AGGA 124836 Query 83262 AGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAA 83319 | ||| | || | || |||||| |||| || || |||||| | ||| || Sbjct 124835 AAAGGAACAAGGGGTCTGTATCCTTGC--CGTTCACATCCACCTTCTCCAGCAGCTGGAA 124778 Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379 || ||||| ||||| || || |||||||||||||||||||| ||| |||||| |||| Sbjct 124777 TTTGGGCTCAAAGCCCTTGCCTGGACGGACGTGCTTCAGGGACTGCATAATCTCGTCATT 124718 Query 83380 CT 83381 || Sbjct 124717 CT 124716 >seq138 Length=509417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 ||||||| ||||||||||| || || ||| || || || |||||| | | || Sbjct 326003 CCTGGTGTCCGAACTGGTTGCAGGGAGCCCCCAGAACCACGAGCCCCTTTTCAGCGTAGC 325944 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 || || |||||||||||||||||||| |||| ||| || | |||||||| ||||| | Sbjct 325943 GCGTATGGAGCTCGTTCATCTGAGTGTAGTCCCTGACGGTCGTGCCTCAGAGTGACGCGA 325884 Query 83511 CGTTCTCGATGAG 83523 | ||||| || || Sbjct 325883 CATTCTCAATAAG 325871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608194022678360