Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_001731.1
Length=190289
Score E
Sequences producing significant alignments: (Bits) Value
seq527 113 5e-20
seq501 105 8e-18
seq138 87.8 2e-12
>seq527
Length=70141
Score = 113 bits (124), Expect = 5e-20
Identities = 169/235 (72%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 50441 TCTATCTACAACTTCGCTGTGCGTATGCTCGTGTACATGTTTCCAGAGCTCTTTACTGCG 50500
|| ||| ||||||||| ||| |||| ||| ||||| || |||||||| ||
Sbjct 41654 TCCATCGGCAACTTCGCCTCGCGCCTGCTGGTGCTGATGTTCCCCGAGCTCTTCACCTAC 41713
Query 50501 GAGAACCTGCACACGCACTTCAACTGCTACGGCTCCATGGGCAAGC-GCAGGCTCGACCC 50559
|||||| || || | ||| ||||||| |||||| |||||||| |||| || |||||
Sbjct 41714 GAGAACGCGCGCAAGAACTACAACTGCAGCGGCTCGCTGGGCAAGAAGCAG-CTGGACCC 41772
Query 50560 GCTACGCCTGCGCTTGCTCCGGCACTATGTGCAGTTGCTGCACCCG-GCGGCGCGCAACG 50618
| || || | || |||| ||||| |||||| ||||| ||||| ||| | | ||||
Sbjct 41773 CGTGCGGGTGAACCTGATCCGCCACTACGTGCAGCTGCTGTACCCGCGCGCCAAG-AACG 41831
Query 50619 AGCGCGTGTGGATCACAAAGTTCCTGGCGTGCCTGGACGAGCGCTGCCGGCGCCG 50673
| ||||| |||| ||||| ||| |||||||||||||||||||| ||
Sbjct 41832 ACCGCGTCTGGACGCTGGAGTTCGTGGGCAAGCTGGACGAGCGCTGCCGGCGACG 41886
>seq501
Length=449620
Score = 105 bits (116), Expect = 8e-18
Identities = 173/242 (71%), Gaps = 8/242 (3%)
Strand=Plus/Minus
Query 83144 AACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCACACTGGAGACCAGGCAATGAGCTGG 83203
||||||||||| ||||| || ||||| || | ||| ||||| |||| ||| || |
Sbjct 124953 AACTTCTCGAAATTCCAAGCGACGTCATTCCTGCAGACTGGGCTCCAGATGATGCACTTG 124894
Query 83204 GGGTCGCTCA-CGAGCGTGCTCATGTCGTCGCTAGGCGCCGGCAGGGC-CTCTCGTAGGA 83261
|||||| ||| | || || | ||||||||||||| ||| || |||| | ||||
Sbjct 124893 GGGTCGGTCATCAAGGATG-TGGTGTCGTCGCTAGGGAACGGAAGTTTACTCTTG-AGGA 124836
Query 83262 AGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACCTCGCACTTCTCGAAGAGCATAAA 83319
| ||| | || | || |||||| |||| || || |||||| | ||| ||
Sbjct 124835 AAAGGAACAAGGGGTCTGTATCCTTGC--CGTTCACATCCACCTTCTCCAGCAGCTGGAA 124778
Query 83320 GTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAGGGAAGGCAAGATCTCGGCATT 83379
|| ||||| ||||| || || |||||||||||||||||||| ||| |||||| ||||
Sbjct 124777 TTTGGGCTCAAAGCCCTTGCCTGGACGGACGTGCTTCAGGGACTGCATAATCTCGTCATT 124718
Query 83380 CT 83381
||
Sbjct 124717 CT 124716
>seq138
Length=509417
Score = 87.8 bits (96), Expect = 2e-12
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450
||||||| ||||||||||| || || ||| || || || |||||| | | ||
Sbjct 326003 CCTGGTGTCCGAACTGGTTGCAGGGAGCCCCCAGAACCACGAGCCCCTTTTCAGCGTAGC 325944
Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510
|| || |||||||||||||||||||| |||| ||| || | |||||||| ||||| |
Sbjct 325943 GCGTATGGAGCTCGTTCATCTGAGTGTAGTCCCTGACGGTCGTGCCTCAGAGTGACGCGA 325884
Query 83511 CGTTCTCGATGAG 83523
| ||||| || ||
Sbjct 325883 CATTCTCAATAAG 325871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 608194022678360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |