Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2502 98.7 7e-16 seq14962 95.1 8e-15 >seq2502 Length=134960 Score = 98.7 bits (108), Expect = 7e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||||| ||||||||||| | || | || | |||||| || ||||| || ||||| | Sbjct 28411 CAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACAC 28470 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 ||| ||||| || | || | || || | ||| ||||| |||| ||||||||||||| Sbjct 28471 CTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACAT 28530 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 | ||||| | || | || |||||||||| ||||| Sbjct 28531 AGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCAT 28567 >seq14962 Length=18771 Score = 95.1 bits (104), Expect = 8e-15 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||||| ||||||||||| | || | || | |||||| || ||||| || ||||| | Sbjct 9011 CAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGCACAC 8952 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 | | ||||| || | || | || || | ||| ||||| |||| ||||||||||||| Sbjct 8951 CCAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACACACAT 8892 Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 | ||||| | || | || |||||||||| ||||| Sbjct 8891 AGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCAT 8855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346449228706130