Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq1229 107 2e-18
seq937 105 8e-18
seq23818 102 9e-17
seq770 102 9e-17
seq291 102 9e-17
seq124 102 9e-17
seq20093 98.7 1e-15
seq15201 98.7 1e-15
seq14226 98.7 1e-15
seq890 96.9 4e-15
seq6436 93.3 5e-14
seq1580 93.3 5e-14
seq1056 89.7 6e-13
>seq1229
Length=416894
Score = 107 bits (118), Expect = 2e-18
Identities = 71/79 (90%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 279313 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 279254
Query 60124 TATACTACCGAGGATTGAA 60142
||||||| |||||| ||||
Sbjct 279253 TATACTAACGAGGAGTGAA 279235
>seq937
Length=118861
Score = 105 bits (116), Expect = 8e-18
Identities = 70/78 (90%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 84648 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 84589
Query 60126 TACTACCGAGGATTGAAT 60143
||||| ||||||||| ||
Sbjct 84588 TACTAACGAGGATTGCAT 84571
>seq23818
Length=9799
Score = 102 bits (112), Expect = 9e-17
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 5668 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5609
Query 60126 TACTACCGAGGATTGAATA 60144
||||| |||||| || |||
Sbjct 5608 TACTAACGAGGAGTGCATA 5590
>seq770
Length=184020
Score = 102 bits (112), Expect = 9e-17
Identities = 88/108 (81%), Gaps = 2/108 (2%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| | |||| || | |||||| |||||| ||||||||||||||||||||| ||||
Sbjct 158303 AAAAATCTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 158244
Query 60117 TCACCACTATACTACCGAGGATTGAATATATAACTTGAATATTACAAT 60164
| |||||||||||| |||||| ||| ||| | | | ||||| ||||
Sbjct 158243 TGACCACTATACTAACGAGGA--GAAGATACAGCATAAATATGCCAAT 158198
>seq291
Length=438289
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 281877 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 281936
Query 60126 TACTACCGAGGATTGA 60141
||||| |||||| |||
Sbjct 281937 TACTAACGAGGAGTGA 281952
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 274745 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 274804
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 274805 TACTAACGAGGA 274816
>seq124
Length=297192
Score = 102 bits (112), Expect = 9e-17
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 101302 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 101243
Query 60126 TACTACCGAGGATTGAATA 60144
||||| |||||| || |||
Sbjct 101242 TACTAACGAGGAGTGCATA 101224
>seq20093
Length=17947
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 12850 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 12791
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 12790 TACTAACGAGGA 12779
>seq15201
Length=36913
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 18079 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 18020
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 18019 TACTAACGAGGA 18008
>seq14226
Length=48749
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 23913 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 23854
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 23853 TACTAACGAGGA 23842
>seq890
Length=71331
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||| || ||||| || | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 21561 AAAGATGCTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 21502
Query 60117 TCACCACTATACTACCGAGGA 60137
|| ||||||||||| ||||||
Sbjct 21501 TCTCCACTATACTAACGAGGA 21481
>seq6436
Length=57996
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 44597 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGGCCAC 44538
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 44537 TATACTAACGAGGA 44524
>seq1580
Length=225455
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 3267 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 3208
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 3207 TATACTAACGAGGA 3194
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 7286 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 7227
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 7226 TATACTAACGAGGA 7213
>seq1056
Length=55933
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 12139 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 12080
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 12079 TACTAACGAGGA 12068
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| ||||||
Sbjct 44867 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 44808
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 44807 TACTAACGAGGA 44796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571251436246520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |