Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq1229 107 2e-18 seq937 105 8e-18 seq23818 102 9e-17 seq770 102 9e-17 seq291 102 9e-17 seq124 102 9e-17 seq20093 98.7 1e-15 seq15201 98.7 1e-15 seq14226 98.7 1e-15 seq890 96.9 4e-15 seq6436 93.3 5e-14 seq1580 93.3 5e-14 seq1056 89.7 6e-13 >seq1229 Length=416894 Score = 107 bits (118), Expect = 2e-18 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 279313 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 279254 Query 60124 TATACTACCGAGGATTGAA 60142 ||||||| |||||| |||| Sbjct 279253 TATACTAACGAGGAGTGAA 279235 >seq937 Length=118861 Score = 105 bits (116), Expect = 8e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 84648 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 84589 Query 60126 TACTACCGAGGATTGAAT 60143 ||||| ||||||||| || Sbjct 84588 TACTAACGAGGATTGCAT 84571 >seq23818 Length=9799 Score = 102 bits (112), Expect = 9e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 5668 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5609 Query 60126 TACTACCGAGGATTGAATA 60144 ||||| |||||| || ||| Sbjct 5608 TACTAACGAGGAGTGCATA 5590 >seq770 Length=184020 Score = 102 bits (112), Expect = 9e-17 Identities = 88/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| | |||| || | |||||| |||||| ||||||||||||||||||||| |||| Sbjct 158303 AAAAATCTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 158244 Query 60117 TCACCACTATACTACCGAGGATTGAATATATAACTTGAATATTACAAT 60164 | |||||||||||| |||||| ||| ||| | | | ||||| |||| Sbjct 158243 TGACCACTATACTAACGAGGA--GAAGATACAGCATAAATATGCCAAT 158198 >seq291 Length=438289 Score = 102 bits (112), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 281877 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 281936 Query 60126 TACTACCGAGGATTGA 60141 ||||| |||||| ||| Sbjct 281937 TACTAACGAGGAGTGA 281952 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 274745 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 274804 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 274805 TACTAACGAGGA 274816 >seq124 Length=297192 Score = 102 bits (112), Expect = 9e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 101302 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 101243 Query 60126 TACTACCGAGGATTGAATA 60144 ||||| |||||| || ||| Sbjct 101242 TACTAACGAGGAGTGCATA 101224 >seq20093 Length=17947 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 12850 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 12791 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 12790 TACTAACGAGGA 12779 >seq15201 Length=36913 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 18079 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 18020 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 18019 TACTAACGAGGA 18008 >seq14226 Length=48749 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 23913 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 23854 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 23853 TACTAACGAGGA 23842 >seq890 Length=71331 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| || ||||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 21561 AAAGATGCTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 21502 Query 60117 TCACCACTATACTACCGAGGA 60137 || ||||||||||| |||||| Sbjct 21501 TCTCCACTATACTAACGAGGA 21481 >seq6436 Length=57996 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||| Sbjct 44597 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGGCCAC 44538 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 44537 TATACTAACGAGGA 44524 >seq1580 Length=225455 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 3267 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 3208 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 3207 TATACTAACGAGGA 3194 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 7286 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 7227 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 7226 TATACTAACGAGGA 7213 >seq1056 Length=55933 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 12139 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 12080 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 12079 TACTAACGAGGA 12068 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 44867 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 44808 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 44807 TACTAACGAGGA 44796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571251436246520