Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq36092 84.2 2e-11
seq8880 84.2 2e-11
seq1886 84.2 2e-11
>seq36092
Length=2431
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
|| || || || || | |||||| || || || ||||| ||||| || || | || ||
Sbjct 1393 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 1334
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| || || | ||||| || ||||| ||||| || ||||||||||| ||||| ||
Sbjct 1333 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 1274
Query 16379 ACCAATCGCTCACC 16392
|||| ||||| ||
Sbjct 1273 ACCACGCGCTCCCC 1260
>seq8880
Length=37550
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
|| || || || || | |||||| || || || ||||| ||||| || || | || ||
Sbjct 743 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 802
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| || || | ||||| || ||||| ||||| || ||||||||||| ||||| ||
Sbjct 803 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 862
Query 16379 ACCAATCGCTCACC 16392
|||| ||||| ||
Sbjct 863 ACCACACGCTCCCC 876
>seq1886
Length=180247
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318
|| || || || || | |||||| || || || ||||| ||||| || || | || ||
Sbjct 87340 TCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCTTC 87399
Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378
| ||| || || | ||||| || ||||| ||||| || ||||||||||| ||||| ||
Sbjct 87400 AACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGGCT 87459
Query 16379 ACCAATCGCTCACC 16392
|||| ||||| ||
Sbjct 87460 ACCACGCGCTCCCC 87473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462054061087400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |