Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq18090 86.0 1e-11 >seq18090 Length=13718 Score = 86.0 bits (94), Expect = 1e-11 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 249271 GGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTG 249330 ||| ||||||||||||| |||| |||||| || || || ||||||||||| || Sbjct 6001 GGGGCGTTCGCCATGTACCTGGAGCCCTGGCACTTTGACATCTTCGAGTTCCTGGAGCTG 5942 Query 249331 AAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTC 249390 || ||||||| || || ||| | | || || ||||||||||||| ||| ||| || Sbjct 5941 AAGAAGAACACGGGGAAGGAGGAGCAGCGGGCTCGCGACCTCTTCTACGCCCTCTGGATC 5882 Query 249391 TCCGACTTGTTCATG 249405 ||||| | |||||| Sbjct 5881 CCCGACCTCTTCATG 5867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072676671726912