Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq7938 84.2 2e-11 >seq7938 Length=58116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890 ||||||||| || || || ||| | || ||||| || || ||| | || || || | || Sbjct 33732 CATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 33791 Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950 ||||| | || | || |||| || || | || |||||| | || ||||| Sbjct 33792 CGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCA 33851 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 ||| | | || | |||||||||||| ||||||||| | ||| || ||| |||| Sbjct 33852 GCAGAGGCTGATCTTTGCGGGCAAACAGCTGGAAGATGGCCGCACTCTGTCCGACTACAA 33911 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTG 25041 ||| ||||| ||| |||| || || || ||| Sbjct 33912 CATCCAGAAGGAGTCCACCCTGCACTTGGTG 33942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417900186181280