Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq14962 140 3e-28 seq2502 140 3e-28 >seq14962 Length=18771 Score = 140 bits (154), Expect = 3e-28 Identities = 136/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || |||| ||| ||||||| ||||| || ||||| |||||||||||||| || | Sbjct 9017 TCAGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGG 8958 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || | |||||||| |||||| ||||||||||||||||||||||||||| | Sbjct 8957 GCACACCCAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCAC 8898 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 ||| || ||||| |||| |||| || || || || |||||| | | ||||| Sbjct 8897 ACACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTC 8843 >seq2502 Length=134960 Score = 140 bits (154), Expect = 3e-28 Identities = 136/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || |||| ||| ||||||| ||||| || ||||| |||||||||||||| || | Sbjct 28405 TCAGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGG 28464 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || | |||||||| |||||| ||||||||||||||||||||||||||| | Sbjct 28465 GCACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCAC 28524 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTC 21163 ||| || ||||| |||| |||| || || || || |||||| | | ||||| Sbjct 28525 ACACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTC 28579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427363042294320