Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq18171 98.7 7e-16 seq3116 98.7 7e-16 >seq18171 Length=35654 Score = 98.7 bits (108), Expect = 7e-16 Identities = 101/131 (77%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| || |||||||| ||||| || | || || || || ||||| ||||| ||||||| Sbjct 27528 TGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGC 27469 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 |||||||||| |||||||| || || | || ||||||||| | || ||||| |||| Sbjct 27468 TGAAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACG 27409 Query 22868 AAGGTCTACAC 22878 |||| |||| Sbjct 27408 -AGGTACACAC 27399 >seq3116 Length=119845 Score = 98.7 bits (108), Expect = 7e-16 Identities = 101/131 (77%), Gaps = 1/131 (1%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| || |||||||| ||||| || | || || || || ||||| ||||| ||||||| Sbjct 115531 TGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCCGCCATCTTCTGGC 115472 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 |||||||||| |||||||| || || | || ||||||||| | || ||||| |||| Sbjct 115471 TGAAGAAACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCTCATCAGCCGAGACG 115412 Query 22868 AAGGTCTACAC 22878 |||| |||| Sbjct 115411 -AGGTACACAC 115402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355889706443227