Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq7938 87.8 1e-12
>seq7938
Length=58116
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||||| || |||||||| || || ||||| || | || || | | || ||
Sbjct 30602 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 30543
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||| || || ||| | || || |||||||| || ||| | ||||||||||||
Sbjct 30542 CAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTG 30483
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|| || || || | | | || |||| |||||| || | ||| ||||| ||
Sbjct 30482 GATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTT 30423
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044
|| || | || |||||||| || ||||||||
Sbjct 30422 GCCAGTCAGTGTCTTGACAAAGATCTGCATTTT 30390
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||||| || |||||||| || || ||||| || | || || | | || ||
Sbjct 30830 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 30771
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||| || || ||| | || || |||||||| || ||| | ||||||||||||
Sbjct 30770 CAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTG 30711
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|| || || || | | | || |||| |||||| || | ||| ||||| ||
Sbjct 30710 GATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTT 30651
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||||| | || ||||| || || |||||
Sbjct 30650 GCCTGTGAGGGTCTTGACGAAGATCTGCAT 30621
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||||| || |||||||| || || ||||| || | || || | | || ||
Sbjct 31058 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 30999
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||| || || ||| | || || |||||||| || ||| | ||||||||||||
Sbjct 30998 CAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTG 30939
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|| || || || | | | || |||| |||||| || | ||| ||||| ||
Sbjct 30938 GATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTT 30879
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||||| | || ||||| || || |||||
Sbjct 30878 GCCTGTGAGGGTCTTGACGAAGATCTGCAT 30849
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||||| || |||||||| || || ||||| || | || || | | || ||
Sbjct 31286 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 31227
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||| || || ||| | || || |||||||| || ||| | ||||||||||||
Sbjct 31226 CAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTG 31167
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|| || || || | | | || |||| |||||| || | ||| ||||| ||
Sbjct 31166 GATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTT 31107
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||||| | || ||||| || || |||||
Sbjct 31106 GCCTGTGAGGGTCTTGACGAAGATCTGCAT 31077
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| ||||| || |||||||| || || ||||| || | || || | | || ||
Sbjct 33030 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTC 32971
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|||||| || || ||| | || || |||||||| || ||| | ||||||||||||
Sbjct 32970 CAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTG 32911
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
|| || || || | | | || |||| |||||| || | ||| ||||| ||
Sbjct 32910 GATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTT 32851
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
||||| | || ||||| || || |||||
Sbjct 32850 GCCTGTGAGGGTCTTGACGAAGATCTGCAT 32821
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18814 TCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGC 18873
||| ||||| | | | ||||| ||||| || |||||||| || || ||||| || |
Sbjct 33960 TCCCCCTCGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 33901
Query 18874 CATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGG 18933
|| || | | || ||||||||||| |||||| | || || |||||||| || |||
Sbjct 33900 CAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGG 33841
Query 18934 CACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGT 18993
| ||| || ||||| || || || || | | | || |||| ||||||
Sbjct 33840 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 33781
Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | ||| ||||| || ||||| | || ||||| || || |||||
Sbjct 33780 CTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 33733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414172588131346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |