Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq7938 87.8 2e-12 >seq7938 Length=58116 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 19981 TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCC 20040 ||| ||||| | | | |||||| || || || || || || || |||||||| ||| Sbjct 33960 TCCCCCTCGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 33901 Query 20041 CATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGG 20100 || ||| |||||||| |||||||||||| | || |||||||| || || ||| Sbjct 33900 CAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGG 33841 Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160 | |||||| ||||| || || ||||| | ||| | |||| || ||| Sbjct 33840 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGCTCCAC 33781 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||| ||||| ||||| || | || ||||| || || ||||| Sbjct 33780 CTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 33733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419182147431729