Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq2553 165 2e-35
seq7938 141 2e-28
seq3404 96.9 8e-15
seq417 95.1 3e-14
seq3157 93.3 1e-13
seq36092 89.7 1e-12
seq8880 89.7 1e-12
seq1886 89.7 1e-12
>seq2553
Length=132868
Score = 165 bits (182), Expect = 2e-35
Identities = 175/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 28735 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 28676
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 28675 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 28616
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 28615 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 28556
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|||||||| || || ||||| ||||| || ||||| ||||| |||||||||
Sbjct 28555 ACCTCTAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACAAAGATCTGCATT 28505
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 28963 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 28904
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 28903 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 28844
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 28843 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 28784
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 28783 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 28734
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 29191 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 29132
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 29131 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 29072
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 29071 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 29012
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 29011 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 28962
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 29419 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 29360
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 29359 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 29300
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 29299 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 29240
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 29239 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29190
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 29647 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 29588
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 29587 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 29528
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 29527 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 29468
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 29467 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29418
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 29875 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 29816
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 29815 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 29756
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 29755 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 29696
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 29695 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 29646
Score = 158 bits (174), Expect = 3e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | || || || || | || || || ||||| || || |||||
Sbjct 30647 ATCCCTCCTCTAAGACGCAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCG 30588
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| || || ||||||||||| || |||||||| || ||||||
Sbjct 30587 GACAGGGTGCGGCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGA 30528
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || ||||| ||||| || || ||||| || | ||| || || || ||
Sbjct 30527 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCC 30468
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 30467 ACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 30418
Score = 152 bits (168), Expect = 1e-31
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | || ||||| || || ||||||
Sbjct 30842 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCA 30783
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || |||||||| || ||||| || ||||| ||||| || ||
Sbjct 30782 GCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 30723
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| || || || || ||||| || ||||| ||||| ||||| || ||
Sbjct 30722 ACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAATGGTCTTGCCAGTCAGGGTC 30663
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 30662 TTCACAAAGATCTGCAT 30646
>seq7938
Length=58116
Score = 141 bits (156), Expect = 2e-28
Identities = 152/201 (76%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || || || | || ||||| || || || ||
Sbjct 30589 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 30530
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || |||||||| || || || || || || ||||| ||||| ||||| || ||
Sbjct 30529 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 30470
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||||| || || ||||| || || || ||||| ||||| |||||
Sbjct 30469 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 30410
Query 104543 TTTACAAATATCTGCATTTTG 104563
|| ||||| ||||||||||||
Sbjct 30409 TTGACAAAGATCTGCATTTTG 30389
>seq3404
Length=165914
Score = 96.9 bits (106), Expect = 8e-15
Identities = 88/110 (80%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 104456 CCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCT 104515
||||| ||||| ||||||||||| || ||||| || | ||| ||||| ||||| |||||
Sbjct 55392 CCTTCCTTATCTTGAATCTTTGCCTTCACATTCTCGATGGTGTCGCTGGGTTCCACCTCG 55333
Query 104516 AGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT-TTTGT 104564
|| || || || || || || | ||||| |||||||||||||| |||||
Sbjct 55332 AGGGTGATGGTTTTCCCTGTCAACGTTTTCACAAATATCTGCATCTTTGT 55283
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429
||||||||||||| ||||| |||| || | || ||||| || ||||| ||||||||||
Sbjct 55795 CTTTCTGAATATTGTAGTCTGATAATGTGCGTCCATCTTCAAGCTGTTTGCCAGCAAAAA 55736
Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCT 104458
| | | ||| ||||||||||| ||||||
Sbjct 55735 TCAAGCGCTGCTGATCAGGAGGGATTCCT 55707
>seq417
Length=656751
Score = 95.1 bits (104), Expect = 3e-14
Identities = 118/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 78487 AGCATTATGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCAT 78546
|||||| |||||||| ||| | ||||| || | || |||||||| || | ||||||||
Sbjct 365618 AGCATTGTGGTGGTACTATGTGTCTAAGGGTGTGGAGTACCTAGACACAGTGTTCTTCAT 365559
Query 78547 CCTACGAAAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTT 78606
||| || ||||| ||||| || | || || | ||||| || || || | || |||||
Sbjct 365558 CCTGCGTAAGAAGTTTAACCAGGTCAGCTTCTTGCATGTCTACCACCACTGCACCATGTT 365499
Query 78607 TACTTTGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACA 78648
|| | | ||||| || || || ||| | || ||||||||
Sbjct 365498 CACCCTCTGGTGGATCGGCATCAAGTGGGTGGCCGGAGGACA 365457
>seq3157
Length=146772
Score = 93.3 bits (102), Expect = 1e-13
Identities = 116/157 (74%), Gaps = 4/157 (3%)
Strand=Plus/Plus
Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553
|||||||| || |||| ||||| | || ||||| || || | ||||||||||| ||
Sbjct 115216 TGGTGGTACTACCTCTCAAAAGGTGTGGAGTACCTGGACACGGTTTTCTTCATCCTGCGG 115275
Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTT--TACTT 78611
||||| || || || | || || || ||||| || || || | ||| ||||| | |||
Sbjct 115276 AAGAAGTTCAACCAGGTCAGCTTCCTGCATGTGTACCACCACTGTACCATGTTCATCCTT 115335
Query 78612 TGGGATGGATAGGTATTAAATGGTTCGCAGGAGGACA 78648
||| ||||| || || || ||| |||| ||||||||
Sbjct 115336 TGG--TGGATCGGGATCAAGTGGGTCGCTGGAGGACA 115370
>seq36092
Length=2431
Score = 89.7 bits (98), Expect = 1e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || ||||| || || ||||| || ||||| || ||||| ||||| | ||||| |||
Sbjct 1272 GTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 1331
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
|||||||| || || || ||||| || | || ||||| ||||| |||| ||||| ||
Sbjct 1332 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGATCAGCAGAGAT 1391
Query 269258 GA 269259
||
Sbjct 1392 GA 1393
>seq8880
Length=37550
Score = 89.7 bits (98), Expect = 1e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || ||||| || || ||||| || ||||| || ||||| ||||| | ||||| |||
Sbjct 864 GTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 805
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
|||||||| || || || ||||| || | || ||||| ||||| |||| ||||| ||
Sbjct 804 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGATCAGCAGAGAT 745
Query 269258 GA 269259
||
Sbjct 744 GA 743
>seq1886
Length=180247
Score = 89.7 bits (98), Expect = 1e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|| || ||||| || || ||||| || ||||| || ||||| ||||| | ||||| |||
Sbjct 87461 GTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCTTCCATCTTCTGG 87402
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
|||||||| || || || ||||| || | || ||||| ||||| |||| ||||| ||
Sbjct 87401 TTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTGATCAGCAGAGAT 87342
Query 269258 GA 269259
||
Sbjct 87341 GA 87340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150229885702972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |