Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq14962 118 7e-22 seq2502 118 7e-22 >seq14962 Length=18771 Score = 118 bits (130), Expect = 7e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| |||| || || || || | ||||||||||| ||||| || || || | || Sbjct 7924 CATGTCTTTGTATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAATC 7865 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || || ||||||| ||| || ||||| |||||||| || | ||| ||||| || || Sbjct 7864 CCCTTCCTCCCTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATC 7805 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||| || || || || ||||| || ||||||||||| ||||| ||||| Sbjct 7804 CCAAATTTTCACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCC 7757 Score = 118 bits (130), Expect = 7e-22 Identities = 132/175 (75%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 ||||| || | || || |||||||||||||| || |||||||||||||| ||||| Sbjct 9015 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 8956 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || |||||||||| | || |||| |||||| ||||| || || ||||| | || | Sbjct 8955 ACACCCAACCCCATGT-CTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACA 8897 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 ||| || ||||| |||| || || ||| || || || || || ||| || |||| Sbjct 8896 CACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 8842 >seq2502 Length=134960 Score = 118 bits (130), Expect = 7e-22 Identities = 132/175 (75%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 ||||| || | || || |||||||||||||| || |||||||||||||| ||||| Sbjct 28407 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 28466 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || |||||||||| | || |||| |||||| ||||| || || ||||| | || | Sbjct 28467 ACACCTAACCCCATGT-CTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACA 28525 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCT 25665 ||| || ||||| |||| || || ||| || || || || || ||| || |||| Sbjct 28526 CACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 28580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339809244872757