Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq8609 86.0 3e-12 seq4193 86.0 3e-12 seq34 86.0 3e-12 seq13737 84.2 1e-11 seq8928 84.2 1e-11 seq6601 84.2 1e-11 seq2993 84.2 1e-11 seq2773 84.2 1e-11 seq1580 84.2 1e-11 seq55 84.2 1e-11 seq51729 82.4 4e-11 seq36860 82.4 4e-11 seq5329 82.4 4e-11 seq1814 82.4 4e-11 >seq8609 Length=39070 Score = 86.0 bits (94), Expect = 3e-12 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| | | |||||| | |||||||||| ||||||| ||||||||||||| Sbjct 38639 AAAAAAAAAAGATAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCAC 38580 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||| |||| Sbjct 38579 CACGCTCTAACCAACTGAGCTAACCGGCC 38551 >seq4193 Length=106313 Score = 86.0 bits (94), Expect = 3e-12 Identities = 74/92 (80%), Gaps = 3/92 (3%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAA---TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 || |||||| ||| ||||||| | |||||||||| ||||||| |||||||||| Sbjct 29447 AAAAAAAAAGAAAAGGTTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAG 29388 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||| |||||||||||||| |||| Sbjct 29387 CACCACGCTCTAACCAACTGAGCTAACCGGCC 29356 >seq34 Length=366559 Score = 86.0 bits (94), Expect = 3e-12 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 274681 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 274622 Query 11528 CCGT 11531 |||| Sbjct 274621 CCGT 274618 >seq13737 Length=36384 Score = 84.2 bits (92), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||| ||| | |||||| | |||||||||| ||||||| ||||||||||||| | Sbjct 7048 AAAAACCAACTGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCA 6989 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 6988 CGCTCTAACCAACTGAGCTAACCGGCC 6962 Score = 84.2 bits (92), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||| ||| | |||||| | |||||||||| ||||||| ||||||||||||| | Sbjct 11228 AAAAACCAACTGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCA 11169 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 11168 CGCTCTAACCAACTGAGCTAACCGGCC 11142 Score = 84.2 bits (92), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAAT--TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||| ||| | |||||| | |||||||||| ||||||| ||||||||||||| | Sbjct 12006 AAAAACCAACTGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCA 11947 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 11946 CGCTCTAACCAACTGAGCTAACCGGCC 11920 >seq8928 Length=68349 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 41370 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 41311 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 41310 CTGAGCTAACCGGCC 41296 >seq6601 Length=89831 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 35279 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 35220 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 35219 CTGAGCTAACCGGCC 35205 >seq2993 Length=113950 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 96201 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 96142 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 96141 CTGAGCTAACCGGCC 96127 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 101520 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 101461 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 101460 CTGAGCTAACCGGCC 101446 >seq2773 Length=126296 Score = 84.2 bits (92), Expect = 1e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||| | |||||||||| ||||||| ||||||||||||| ||| Sbjct 68648 AAAAACGGAAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACG 68707 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||| |||| Sbjct 68708 CTCTAACCAACTGAGCTAACCGGCC 68732 Score = 84.2 bits (92), Expect = 1e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||| | |||||||||| ||||||| ||||||||||||| ||| Sbjct 72133 AAAAACGGAAGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACG 72192 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||| |||| Sbjct 72193 CTCTAACCAACTGAGCTAACCGGCC 72217 >seq1580 Length=225455 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| || || ||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 3323 TTGGCCCGTGCGGGGGTCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 3382 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 3383 CTGAGCTAACCGGCC 3397 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| || || ||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 7342 TTGGCCCGTGCGGGGGTCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 7401 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 7402 CTGAGCTAACCGGCC 7416 >seq55 Length=92866 Score = 84.2 bits (92), Expect = 1e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 24326 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 24267 Query 11528 CCG 11530 ||| Sbjct 24266 CCG 24264 >seq51729 Length=1104 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 937 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 996 Query 11528 CC 11529 || Sbjct 997 CC 998 >seq36860 Length=2281 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 1873 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 1814 Query 11528 CC 11529 || Sbjct 1813 CC 1812 >seq5329 Length=92166 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 81217 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 81276 Query 11528 CC 11529 || Sbjct 81277 CC 81278 >seq1814 Length=219447 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 66965 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 67024 Query 11528 CC 11529 || Sbjct 67025 CC 67026 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261238766936884