Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq2553 96.9 3e-15
>seq2553
Length=132868
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
|||||| | ||||| ||||| | ||||| || | ||||| | || | || | |
Sbjct 28505 AATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACTCTAGAGGTGGAGCCCAG 28564
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|||||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 28565 TGACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCA 28624
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| || || || | | || || || || ||||||| | | | | |||||| ||
Sbjct 28625 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 28684
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||| || || || || ||| |||| ||||||||| | |||||||||||
Sbjct 28685 CATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 28732
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || | ||||| || | || ||| | || | || | |
Sbjct 28734 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 28793
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 28794 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 28853
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | | || || || || ||||||| | | | | |||||| |||
Sbjct 28854 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 28913
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || || || ||| |||| ||||||||| | |||||||||||
Sbjct 28914 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 28960
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || | ||||| || | || ||| | || | || | |
Sbjct 28962 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 29021
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 29022 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 29081
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | | || || || || ||||||| | | | | |||||| |||
Sbjct 29082 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 29141
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || || || ||| |||| ||||||||| | |||||||||||
Sbjct 29142 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 29188
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || | ||||| || | || ||| | || | || | |
Sbjct 29190 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 29249
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 29250 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 29309
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | | || || || || ||||||| | | | | |||||| |||
Sbjct 29310 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 29369
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || || || ||| |||| ||||||||| | |||||||||||
Sbjct 29370 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 29416
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || | ||||| || | || ||| | || | || | |
Sbjct 29418 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 29477
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 29478 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 29537
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | | || || || || ||||||| | | | | |||||| |||
Sbjct 29538 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 29597
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || || || ||| |||| ||||||||| | |||||||||||
Sbjct 29598 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 29644
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || | ||||| || | || ||| | || | || | |
Sbjct 29646 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 29705
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 29706 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 29765
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | | || || || || ||||||| | | | | |||||| |||
Sbjct 29766 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 29825
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || || || ||| |||| ||||||||| | |||||||||||
Sbjct 29826 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 29872
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| || || | ||||| || | || ||| | || | || | |
Sbjct 30418 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATTACCCTGGAGGTGGAGCCCAGT 30477
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 30478 GACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCTGACCAG 30537
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || || | | || || || || ||||||| | | | | |||||| |||
Sbjct 30538 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 30597
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || || || ||| |||| ||||||||| | |||||||||||
Sbjct 30598 ATCCAGAAGGAGTCAACTCTCCACCTGGTCCTGCGTCTTAGAGGAGG 30644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478188470374480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |