Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq18090 100 7e-16 seq16166 100 7e-16 seq14962 91.5 4e-13 >seq18090 Length=13718 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| || | |||| || |||| || ||||||| ||||| || || ||||| ||| Sbjct 5125 GCCCAGCAGGTGTGGTACGCGGTCATCGAATCGCAGACGGAGACGGGCACGCCCTACATG 5066 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| || | |||||||||||| |||||||||| |||| || || || || Sbjct 5065 CTCTACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGC 5006 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || |||||||| | || |||||| Sbjct 5005 AGCAACCTGTGCACCGAGATCGTGGAGTACACC 4973 >seq16166 Length=16622 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| || | |||| || |||| || ||||||| ||||| || || ||||| ||| Sbjct 173 GCCCAGCAGGTGTGGTACGCGGTCATCGAATCGCAGACGGAGACGGGCACGCCCTACATG 114 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| || | |||||||||||| |||||||||| |||| || || || || Sbjct 113 CTCTACAAGGACGCCTGCAACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGC 54 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || |||||||| | || |||||| Sbjct 53 AGCAACCTGTGCACCGAGATCGTGGAGTACACC 21 >seq14962 Length=18771 Score = 91.5 bits (100), Expect = 4e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 111390 ACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGT 111449 |||||| | || || || | | ||| ||| ||||||||||||| ||||||||| ||| Sbjct 7763 ACAAATTCCAAAGAGCTGTCGGAGAAAGGTGTGAAAATTTGGGATGCAAATGGATCCCGT 7822 Query 111450 GACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTAC 111509 || ||| | || ||| || ||| || ||||| ||| | || || |||||| Sbjct 7823 GATTTTTTGGACAAGAGTGGATTTACTAACAGGGAGGAAGGGGATTTGGGCCCTGTTTAC 7882 Query 111510 GGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || ||| | ||||||||||| || |||||| ||||||| Sbjct 7883 GGTTTCCAGTGGAGACACTTTGGTGCTGAATACAAAGACATGCAC 7927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302030871641438