Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq27105 96.9 7e-15
seq3836 93.3 9e-14
seq7748 91.5 3e-13
seq5928 89.7 1e-12
seq5345 89.7 1e-12
seq3369 89.7 1e-12
seq1592 89.7 1e-12
seq1178 89.7 1e-12
seq667 89.7 1e-12
seq2197 86.0 1e-11
>seq27105
Length=6654
Score = 96.9 bits (106), Expect = 7e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| |||||| |||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1690 ATCGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 1631
Query 142561 AGCCCCACATCGGGCAGAAGT 142581
|||||||| | |||| |||||
Sbjct 1630 AGCCCCACGTTGGGCGGAAGT 1610
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 3167 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3226
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 3227 CCCACGTTGGGC 3238
>seq3836
Length=88978
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
|||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 85765 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 85706
Query 142562 GCCCCACATCGGGC 142575
||||||| | ||||
Sbjct 85705 GCCCCACGTTGGGC 85692
>seq7748
Length=43948
Score = 91.5 bits (100), Expect = 3e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 217822 AAAAACTCTGGTCTCTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCA 217881
||||||||||| |||||| |||||||| |||||||| || || || || |||||
Sbjct 4367 AAAAACTCTGGCTCCTGCACCCTCATCCTCACAGAGGGGGATTCGGCCAAAACCCTGGCC 4426
Query 217882 ACCGCTGGTCTTGCCGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAG 217941
| || || | |||||| || || || | || || |||||||||| || |||||
Sbjct 4427 GTGTCCGGGCTGGGCGTGGTCGGCCGAGACCGCTACGGAGTCTTCCCCCTGCGCGGTAAA 4486
Query 217942 CTGCTCAACGTGCGCGATGCCTC 217964
||||||||||||| || |||||
Sbjct 4487 ATGCTCAACGTGCGGGAGGCCTC 4509
>seq5928
Length=37174
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 31096 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 31155
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 31156 CCCACGTTGGGC 31167
>seq5345
Length=82535
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 37686 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 37627
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 37626 CCCACGTTGGGC 37615
>seq3369
Length=102261
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 29292 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 29233
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 29232 CCCACGTTGGGC 29221
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||| || |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 31693 GCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 31634
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 31633 CCCACGTTGGGC 31622
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct 33328 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTGCGAGC 33269
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 33268 CCCACGTTGGGC 33257
>seq1592
Length=269118
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 100339 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 100398
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 100399 CCCACGTTGGGC 100410
>seq1178
Length=128233
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 40914 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 40855
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 40854 CCCACGTTGGGC 40843
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 48784 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 48843
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 48844 CCCACGTTGGGC 48855
>seq667
Length=239125
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 217945 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 218004
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 218005 CCCACGTTGGGC 218016
>seq2197
Length=153005
Score = 86.0 bits (94), Expect = 1e-11
Identities = 63/72 (88%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111
||||||||||||||||||| |||||| ||||||||||||||| ||| | |||||||||
Sbjct 10385 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 10326
Query 142112 CCCCGCCAGAGA 142123
|||| ||||||
Sbjct 10325 TCCCGGCAGAGA 10314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1026793684084769
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |