Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq670 84.2 2e-11 seq7938 82.4 6e-11 >seq670 Length=345836 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/85 (85%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 115587 |||||||| ||||||||||| |||| |||||||||||||| | | |||| ||||||| Sbjct 334456 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 334397 Query 115588 CAAAACTGATATATTGAGCCATTCG 115612 || ||||||| || ||||||||||| Sbjct 334396 CATAACTGATTTAATGAGCCATTCG 334372 Score = 84.2 bits (92), Expect = 2e-11 Identities = 72/85 (85%), Gaps = 3/85 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 114390 |||||||| ||||||||||| |||| |||||||||||||| | | |||| ||||||| Sbjct 334456 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 334397 Query 114391 CAAAACTGATATATTGAGCCATTCG 114415 || ||||||| || ||||||||||| Sbjct 334396 CATAACTGATTTAATGAGCCATTCG 334372 >seq7938 Length=58116 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || |||||||||| || || ||| ||||||||| |||||||| || | | Sbjct 30619 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 30560 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| ||||| | |||||| || || Sbjct 30559 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 30500 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 30499 ATGCCCTCTTTGTCC 30485 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || |||||||||| || || ||| ||||||||| |||||||| || | | Sbjct 30847 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 30788 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| ||||| | |||||| || || Sbjct 30787 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 30728 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 30727 ATGCCCTCTTTGTCC 30713 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || |||||||||| || || ||| ||||||||| |||||||| || | | Sbjct 31075 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 31016 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| ||||| | |||||| || || Sbjct 31015 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 30956 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 30955 ATGCCCTCTTTGTCC 30941 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || |||||||||| || || ||| ||||||||| |||||||| || | | Sbjct 31303 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 31244 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| ||||| | |||||| || || Sbjct 31243 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 31184 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 31183 ATGCCCTCTTTGTCC 31169 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || |||||||||| || || ||| ||||||||| |||||||| || | | Sbjct 33047 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 32988 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| ||||| | |||||| || || Sbjct 32987 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 32928 Query 34021 ACGCTCTCTTTGTCC 34035 | || |||||||||| Sbjct 32927 ATGCCCTCTTTGTCC 32913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396679091965618