Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq670 84.2 2e-11
seq7938 82.4 6e-11
>seq670
Length=345836
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/85 (85%), Gaps = 3/85 (4%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 115587
|||||||| ||||||||||| |||| |||||||||||||| | | |||| |||||||
Sbjct 334456 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 334397
Query 115588 CAAAACTGATATATTGAGCCATTCG 115612
|| ||||||| || |||||||||||
Sbjct 334396 CATAACTGATTTAATGAGCCATTCG 334372
Score = 84.2 bits (92), Expect = 2e-11
Identities = 72/85 (85%), Gaps = 3/85 (4%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 114390
|||||||| ||||||||||| |||| |||||||||||||| | | |||| |||||||
Sbjct 334456 CATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 334397
Query 114391 CAAAACTGATATATTGAGCCATTCG 114415
|| ||||||| || |||||||||||
Sbjct 334396 CATAACTGATTTAATGAGCCATTCG 334372
>seq7938
Length=58116
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || || || |||||||||| || || ||| ||||||||| |||||||| || | |
Sbjct 30619 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 30560
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || |||| |||||||||||||| ||||| | |||||| || ||
Sbjct 30559 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 30500
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||||||||||
Sbjct 30499 ATGCCCTCTTTGTCC 30485
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || || || |||||||||| || || ||| ||||||||| |||||||| || | |
Sbjct 30847 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 30788
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || |||| |||||||||||||| ||||| | |||||| || ||
Sbjct 30787 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 30728
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||||||||||
Sbjct 30727 ATGCCCTCTTTGTCC 30713
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || || || |||||||||| || || ||| ||||||||| |||||||| || | |
Sbjct 31075 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 31016
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || |||| |||||||||||||| ||||| | |||||| || ||
Sbjct 31015 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 30956
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||||||||||
Sbjct 30955 ATGCCCTCTTTGTCC 30941
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || || || |||||||||| || || ||| ||||||||| |||||||| || | |
Sbjct 31303 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 31244
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || |||| |||||||||||||| ||||| | |||||| || ||
Sbjct 31243 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 31184
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||||||||||
Sbjct 31183 ATGCCCTCTTTGTCC 31169
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || || || |||||||||| || || ||| ||||||||| |||||||| || | |
Sbjct 33047 CCGCCCCTGAGTCGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 32988
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || |||| |||||||||||||| ||||| | |||||| || ||
Sbjct 32987 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 32928
Query 34021 ACGCTCTCTTTGTCC 34035
| || ||||||||||
Sbjct 32927 ATGCCCTCTTTGTCC 32913
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396679091965618
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |