Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7938 132 1e-25 >seq7938 Length=58116 Score = 132 bits (146), Expect = 1e-25 Identities = 170/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 ||||| || ||||| | ||| || | || | ||| || || ||||| || |||||| Sbjct 33962 TGTCCCCCTCGGAGACGAAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCG 33903 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| || ||||| | ||||| || || |||||||| | ||| || ||| Sbjct 33902 GACAGAGTGCGGCCATCTTCCAGCTGTTTGCCCGCAAAGATCAGCCTCTGCTGG---TCT 33846 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || ||||| || |||||||| || || |||||||| || || | ||||| | Sbjct 33845 GGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCGCTGGGC 33786 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 33785 TCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 33733 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 30811 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 30752 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || || ||||| |||||||| || || |||||| Sbjct 30751 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACG 30695 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 30694 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 30635 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 30634 ACGAAGATCTGCAT 30621 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 31039 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 30980 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || || ||||| |||||||| || || |||||| Sbjct 30979 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACG 30923 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 30922 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 30863 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 30862 ACGAAGATCTGCAT 30849 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 31267 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 31208 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || || ||||| |||||||| || || |||||| Sbjct 31207 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACG 31151 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 31150 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 31091 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 31090 ACGAAGATCTGCAT 31077 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 31495 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 31436 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || |||||| Sbjct 31435 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 31379 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 31378 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 31319 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 31318 ACGAAGATCTGCAT 31305 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 32327 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 32268 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || |||||| Sbjct 32267 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 32211 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 32210 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 32151 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 32150 ACGAAGATCTGCAT 32137 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 32555 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 32496 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || |||||| Sbjct 32495 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 32439 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 32438 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 32379 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 32378 ACGAAGATCTGCAT 32365 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 32783 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 32724 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || |||||| Sbjct 32723 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 32667 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 32666 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 32607 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 32606 ACGAAGATCTGCAT 32593 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 33011 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 32952 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || || ||||| |||||||| || || |||||| Sbjct 32951 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTCACG 32895 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 32894 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 32835 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 32834 ACGAAGATCTGCAT 32821 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 33239 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 33180 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || |||||| Sbjct 33179 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 33123 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 33122 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 33063 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 33062 ACGAAGATCTGCAT 33049 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 33467 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 33408 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || |||||| Sbjct 33407 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 33351 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 33350 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 33291 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 33290 ACGAAGATCTGCAT 33277 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| || ||||| || ||||| | || || || || ||| Sbjct 33695 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 33636 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | ||| || |||||| || ||||| || |||||||| || || |||||| Sbjct 33635 ATCAGCCTCTGCTGG---TCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 33579 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||||| | || || || || ||||| ||||| || || || |||||| Sbjct 33578 TTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTG 33519 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 33518 ACGAAGATCTGCAT 33505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178457209668702