Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1229 98.7 1e-15
seq937 96.9 4e-15
seq23818 93.3 5e-14
seq770 93.3 5e-14
seq291 93.3 5e-14
seq124 93.3 5e-14
seq20093 89.7 6e-13
seq15201 89.7 6e-13
seq14226 89.7 6e-13
seq890 87.8 2e-12
seq6436 84.2 2e-11
seq1580 84.2 2e-11
>seq1229
Length=416894
Score = 98.7 bits (108), Expect = 1e-15
Identities = 69/79 (87%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 279313 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 279254
Query 57065 TATACTACCGAGGATTGAA 57083
||||||| |||||| ||||
Sbjct 279253 TATACTAACGAGGAGTGAA 279235
>seq937
Length=118861
Score = 96.9 bits (106), Expect = 4e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 84648 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 84589
Query 57067 TACTACCGAGGATTGAAT 57084
||||| ||||||||| ||
Sbjct 84588 TACTAACGAGGATTGCAT 84571
>seq23818
Length=9799
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 5668 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 5609
Query 57067 TACTACCGAGGATTGAATA 57085
||||| |||||| || |||
Sbjct 5608 TACTAACGAGGAGTGCATA 5590
>seq770
Length=184020
Score = 93.3 bits (102), Expect = 5e-14
Identities = 86/108 (80%), Gaps = 2/108 (2%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| | |||| || | | ||| |||||| ||||||||||||||||||||| ||||
Sbjct 158303 AAAAATCTACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 158244
Query 57058 TCACCACTATACTACCGAGGATTGAATATATAACTTGAATATTGCAAT 57105
| |||||||||||| |||||| ||| ||| | | | ||||| ||||
Sbjct 158243 TGACCACTATACTAACGAGGA--GAAGATACAGCATAAATATGCCAAT 158198
>seq291
Length=438289
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 281877 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 281936
Query 57067 TACTACCGAGGATTGA 57082
||||| |||||| |||
Sbjct 281937 TACTAACGAGGAGTGA 281952
>seq124
Length=297192
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 101302 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 101243
Query 57067 TACTACCGAGGATTGAATA 57085
||||| |||||| || |||
Sbjct 101242 TACTAACGAGGAGTGCATA 101224
>seq20093
Length=17947
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 12850 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 12791
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 12790 TACTAACGAGGA 12779
>seq15201
Length=36913
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 18079 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 18020
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 18019 TACTAACGAGGA 18008
>seq14226
Length=48749
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | |||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 23913 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 23854
Query 57067 TACTACCGAGGA 57078
||||| ||||||
Sbjct 23853 TACTAACGAGGA 23842
>seq890
Length=71331
Score = 87.8 bits (96), Expect = 2e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||| || ||||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 21561 AAAGATGCTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 21502
Query 57058 TCACCACTATACTACCGAGGA 57078
|| ||||||||||| ||||||
Sbjct 21501 TCTCCACTATACTAACGAGGA 21481
>seq6436
Length=57996
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 44597 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGGCCAC 44538
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 44537 TATACTAACGAGGA 44524
>seq1580
Length=225455
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 3267 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 3208
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 3207 TATACTAACGAGGA 3194
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 7286 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 7227
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 7226 TATACTAACGAGGA 7213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542674958216560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |