Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7938 114 1e-20 >seq7938 Length=58116 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 30589 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 30530 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| || ||||| || || || || ||| Sbjct 30529 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 30470 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| |||| || Sbjct 30469 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGTGTC 30410 Query 64427 TTTACGAAAATTTGCATTTTAAT 64449 || || || || |||||||| || Sbjct 30409 TTGACAAAGATCTGCATTTTGAT 30387 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 30817 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 30758 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| || ||||| || || || || ||| Sbjct 30757 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 30698 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 30697 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 30638 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 30637 TTGACGAAGATCTGCAT 30621 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 31045 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 30986 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| || ||||| || || || || ||| Sbjct 30985 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 30926 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 30925 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 30866 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 30865 TTGACGAAGATCTGCAT 30849 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 31273 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 31214 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| || ||||| || || || || ||| Sbjct 31213 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 31154 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 31153 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 31094 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 31093 TTGACGAAGATCTGCAT 31077 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 31501 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 31442 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| ||||| || || || || || ||| Sbjct 31441 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 31382 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 31381 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 31322 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 31321 TTGACGAAGATCTGCAT 31305 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 32333 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 32274 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| ||||| || || || || || ||| Sbjct 32273 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 32214 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 32213 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 32154 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 32153 TTGACGAAGATCTGCAT 32137 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 32561 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 32502 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| ||||| || || || || || ||| Sbjct 32501 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 32442 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 32441 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 32382 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 32381 TTGACGAAGATCTGCAT 32365 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 32789 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 32730 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| ||||| || || || || || ||| Sbjct 32729 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 32670 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 32669 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 32610 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 32609 TTGACGAAGATCTGCAT 32593 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 33017 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 32958 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| || ||||| || || || || ||| Sbjct 32957 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTC 32898 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 32897 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 32838 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 32837 TTGACGAAGATCTGCAT 32821 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 33245 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 33186 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| ||||| || || || || || ||| Sbjct 33185 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 33126 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 33125 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 33066 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 33065 TTGACGAAGATCTGCAT 33049 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 33473 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 33414 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| ||||| || || || || || ||| Sbjct 33413 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 33354 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 33353 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 33294 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 33293 TTGACGAAGATCTGCAT 33277 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | ||||| |||||||||||| Sbjct 33701 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 33642 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| || ||||| ||||| || || || || || ||| Sbjct 33641 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 33582 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || ||| | || || | || ||||| || | || | ||||||||| || | || Sbjct 33581 ACGTTCTCAATGGTGTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTC 33522 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 33521 TTGACGAAGATCTGCAT 33505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499150095437960