Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq18090 87.8 2e-12 seq16166 87.8 2e-12 >seq18090 Length=13718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 94421 AGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTAC 94480 |||||||||||| | ||| || | || | || ||||| | | || | || | Sbjct 5151 AGGGCAAGGCCAAGCGGGTGGTGAAGGCCCAGCAGGTGTGGTACGCGGTCATCGAATCGC 5092 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || ||||||||| ||||||||||| | | ||||||| | |||| |||| ||||| Sbjct 5091 AGACGGAGACGGGCACGCCCTACATGCTCTACAAGGACGCCTGCAACCGCAAGAGCAACC 5032 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 ||||| |||| || |||||| || || |||||||||||||| || ||||| || Sbjct 5031 AGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGCACCGAGATCGTGGAGTACAC 4974 >seq16166 Length=16622 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/178 (71%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 94421 AGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTAC 94480 |||||||||||| | ||| || | || | || ||||| | | || | || | Sbjct 199 AGGGCAAGGCCAAGCGGGTGGTGAAGGCCCAGCAGGTGTGGTACGCGGTCATCGAATCGC 140 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || ||||||||| ||||||||||| | | ||||||| | |||| |||| ||||| Sbjct 139 AGACGGAGACGGGCACGCCCTACATGCTCTACAAGGACGCCTGCAACCGCAAGAGCAACC 80 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATAC 94598 ||||| |||| || |||||| || || |||||||||||||| || ||||| || Sbjct 79 AGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGCACCGAGATCGTGGAGTACAC 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494233368375640