Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq18090 100 3e-16 seq16166 100 3e-16 >seq18090 Length=13718 Score = 100 bits (110), Expect = 3e-16 Identities = 93/117 (79%), Gaps = 6/117 (5%) Strand=Plus/Plus Query 146664 CTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCC 146723 |||||||||| | |||| ||| ||||||| ||| |||||||||||||||||| |||| Sbjct 4961 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 5020 Query 146724 CAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAGAGCATGTACGG 146777 || || | ||||| || ||| |||||||| |||||||||||||||||| || Sbjct 5021 CAGGTTCTGCTGGTTGCT---CTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGG 5074 >seq16166 Length=16622 Score = 100 bits (110), Expect = 3e-16 Identities = 93/117 (79%), Gaps = 6/117 (5%) Strand=Plus/Plus Query 146664 CTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCC 146723 |||||||||| | |||| ||| ||||||| ||| |||||||||||||||||| |||| Sbjct 9 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 68 Query 146724 CAAAtttttttGGTTACTAAACTT---GTTGCAGGGGTCCTTGTAGAGCATGTACGG 146777 || || | ||||| || ||| |||||||| |||||||||||||||||| || Sbjct 69 CAGGTTCTGCTGGTTGCT---CTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGG 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475030000714160