Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_012783.2
Length=226205
Score E
Sequences producing significant alignments: (Bits) Value
seq10270 118 2e-21
seq1461 96.9 5e-15
>seq10270
Length=31464
Score = 118 bits (130), Expect = 2e-21
Identities = 184/257 (72%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTA-ATTGGGCTATTCCGTGCTTGATGAGGAT 9494
|| |||||||| | ||||| || ||| | | |||| | || || || | |||| |
Sbjct 9618 CCTGCAATCTGCTTGGTGAAGGACTCAGCCAGATTGTGG-ATGCCATGGTCCATGACTAC 9676
Query 9495 GGAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATC 9554
|||||||||| | | || || | ||| | || | ||| ||| | || | ||
Sbjct 9677 GGAATTGTTGAAGAGAAACTGCTTGTAGCTGTAGACCTGGTCCTGGATGTGGAAGGCGTC 9736
Query 9555 AGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTA 9614
||||| ||| | |||||| |||||||||| |||||||||| || || |||||||||||
Sbjct 9737 AGGCATCAGCGGGTGCCAGTGGTAGAGGGTGTTGAACTCGGACGAGATGCGGTTCTGGTA 9796
Query 9615 CTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCG 9672
||| ||| || ||| |||||| | ||| ||||| || | |||| ||||||||||||
Sbjct 9797 CTGGAAGCGCTGGT--TGAACAGCAGCTCGGGGTCGAACTTCAGCTTGAAGTGGTACCCA 9854
Query 9673 CTGAGTTGCTGGACATA 9689
|| || ||||| || ||
Sbjct 9855 CTCAGATGCTGCACGTA 9871
>seq1461
Length=415275
Score = 96.9 bits (106), Expect = 5e-15
Identities = 176/255 (69%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495
||||| ||||| | || || || || || | | | | || ||||||| |||| |
Sbjct 57764 CCGGCGATCTGCTTGGTAAAAGACTCCACCAGGTTGCCAATGCCGTGCTCCATGACCAGC 57705
Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555
|| |||||| | | ||| || ||| ||||||| | | | ||| | || ||
Sbjct 57704 GAGTTGTTGAACATGAACTGCGGGTAGCCATACTCCTGGCCCTGGATGTGGAACGAGTCG 57645
Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615
|||| | | |||||| ||||||||| ||||||||||| || || ||||||||||||
Sbjct 57644 GGCATTAACGGGTGCCAGTGGTAGAGGGCATTGAACTCGGAGGCAATGCGGTTCTGGTAC 57585
Query 9616 T-GAAAGGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGCT 9674
| |||| || | |||||| | ||||||||| || | |||| ||| || || || ||
Sbjct 57584 TGGAAACGC-TCATTGAACAGCAGCTCCGGGTCGAACTTCAGCTTGAAATGATAGCCACT 57526
Query 9675 GAGTTGCTGGACATA 9689
|| ||||| || ||
Sbjct 57525 CAGGTGCTGCACGTA 57511
Score = 95.1 bits (104), Expect = 2e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 9726 GATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAG 9785
||| || || ||||| ||||| | |||||||| |||| || ||||| ||| || |
Sbjct 57251 GATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGCTCGCTCTTCAA 57192
Query 9786 AACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGG 9845
| |||||||| | |||||| || | |||||| ||||||||||||||||| | |||||
Sbjct 57191 GATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATCATGAGGCCCGG 57132
Query 9846 CACTAAACCAAACACTTCATTCCCCACTGCAA 9877
|| | || || | || | |||||| ||||
Sbjct 57131 GACCAGGCCGAAGGCCTCGTGCCCCACGGCAA 57100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 723011427860600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |