Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq10270 118 2e-21 seq1461 96.9 5e-15 >seq10270 Length=31464 Score = 118 bits (130), Expect = 2e-21 Identities = 184/257 (72%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTA-ATTGGGCTATTCCGTGCTTGATGAGGAT 9494 || |||||||| | ||||| || ||| | | |||| | || || || | |||| | Sbjct 9618 CCTGCAATCTGCTTGGTGAAGGACTCAGCCAGATTGTGG-ATGCCATGGTCCATGACTAC 9676 Query 9495 GGAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATC 9554 |||||||||| | | || || | ||| | || | ||| ||| | || | || Sbjct 9677 GGAATTGTTGAAGAGAAACTGCTTGTAGCTGTAGACCTGGTCCTGGATGTGGAAGGCGTC 9736 Query 9555 AGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTA 9614 ||||| ||| | |||||| |||||||||| |||||||||| || || ||||||||||| Sbjct 9737 AGGCATCAGCGGGTGCCAGTGGTAGAGGGTGTTGAACTCGGACGAGATGCGGTTCTGGTA 9796 Query 9615 CTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCG 9672 ||| ||| || ||| |||||| | ||| ||||| || | |||| |||||||||||| Sbjct 9797 CTGGAAGCGCTGGT--TGAACAGCAGCTCGGGGTCGAACTTCAGCTTGAAGTGGTACCCA 9854 Query 9673 CTGAGTTGCTGGACATA 9689 || || ||||| || || Sbjct 9855 CTCAGATGCTGCACGTA 9871 >seq1461 Length=415275 Score = 96.9 bits (106), Expect = 5e-15 Identities = 176/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 ||||| ||||| | || || || || || | | | | || ||||||| |||| | Sbjct 57764 CCGGCGATCTGCTTGGTAAAAGACTCCACCAGGTTGCCAATGCCGTGCTCCATGACCAGC 57705 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||| | | ||| || ||| ||||||| | | | ||| | || || Sbjct 57704 GAGTTGTTGAACATGAACTGCGGGTAGCCATACTCCTGGCCCTGGATGTGGAACGAGTCG 57645 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| | | |||||| ||||||||| ||||||||||| || || |||||||||||| Sbjct 57644 GGCATTAACGGGTGCCAGTGGTAGAGGGCATTGAACTCGGAGGCAATGCGGTTCTGGTAC 57585 Query 9616 T-GAAAGGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGCT 9674 | |||| || | |||||| | ||||||||| || | |||| ||| || || || || Sbjct 57584 TGGAAACGC-TCATTGAACAGCAGCTCCGGGTCGAACTTCAGCTTGAAATGATAGCCACT 57526 Query 9675 GAGTTGCTGGACATA 9689 || ||||| || || Sbjct 57525 CAGGTGCTGCACGTA 57511 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 9726 GATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAG 9785 ||| || || ||||| ||||| | |||||||| |||| || ||||| ||| || | Sbjct 57251 GATGAGGCGGGTGGTCTGAAAGAGGCGCTCGTCATCCCAGTCGGGGTGCTCGCTCTTCAA 57192 Query 9786 AACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGG 9845 | |||||||| | |||||| || | |||||| ||||||||||||||||| | ||||| Sbjct 57191 GATGTCGCAGACGCGGTTGTGCTCGCGCAGCCAGATGGTGGCGTACATCATGAGGCCCGG 57132 Query 9846 CACTAAACCAAACACTTCATTCCCCACTGCAA 9877 || | || || | || | |||||| |||| Sbjct 57131 GACCAGGCCGAAGGCCTCGTGCCCCACGGCAA 57100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723011427860600