Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 100 2e-15
seq1185 96.9 3e-14
>seq1537
Length=339721
Score = 100 bits (110), Expect = 2e-15
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| |||| ||||||||||||||||||||| || |||| ||||||||| ||||| | |
Sbjct 16258 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAAAACATTTAGACCTGAA 16199
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
||| | || || || || || ||||| | || ||||| || || || || || || ||
Sbjct 16198 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 16139
Query 518297 ATAACGGC 518304
| ||| ||
Sbjct 16138 ACAACAGC 16131
Score = 87.8 bits (96), Expect = 1e-11
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||| | || ||||| || || |||||| | |||| || || || |||||||||||
Sbjct 15485 CAAACACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTTGCAGCGTCTCCAATCAGTC 15426
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
| || | || || |||| ||||| || || || | || || ||||| || ||||
Sbjct 15425 GCTCACTATCGGTGAATGCTACATAGCTGGGTGTGGTCCTGTTTCCCTGATCGTTGGCAA 15366
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| || |||||||| |||| || | |||||||| || | ||||| || | |||||
Sbjct 15365 TGATCTCAACTTTGCCATGCTGGAAGACACCTACGCAGGAGTAGGTTGTCCCCAGATCAA 15306
Query 518703 TACCAA 518708
||||||
Sbjct 15305 TACCAA 15300
>seq1185
Length=427606
Score = 96.9 bits (106), Expect = 3e-14
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236
||||| |||| ||||||||||||||||||||| || |||| || |||||| ||||| | |
Sbjct 10800 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAGAACATTTAGACCTGAA 10741
Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296
||| | || || || || || ||||| | || ||||| || || || || || || ||
Sbjct 10740 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 10681
Query 518297 ATAACGGC 518304
| ||| ||
Sbjct 10680 ACAACAGC 10673
Score = 89.7 bits (98), Expect = 4e-12
Identities = 130/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||| | || ||||| || || |||||| | |||| || || || |||||||||||
Sbjct 10055 CAAACACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTTGCAGCGTCTCCAATCAGCC 9996
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
| || || || || |||| ||||| || || || | || || ||||| || ||||
Sbjct 9995 GCTCAGTATCGGTGAATGCTACATAGCTGGGTGTGGTCCTGTTTCCCTGATCGTTGGCAA 9936
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| || |||||||| |||| || | |||||||| || | ||||| || | |||||
Sbjct 9935 TGATCTCAACTTTGCCATGCTGGAAGACACCTACGCAGGAGTAGGTTGTCCCCAGATCAA 9876
Query 518703 TACC 518706
||||
Sbjct 9875 TACC 9872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3776891788505554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |