Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1537 100 2e-15 seq1185 96.9 3e-14 >seq1537 Length=339721 Score = 100 bits (110), Expect = 2e-15 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| |||| ||||||||||||||||||||| || |||| ||||||||| ||||| | | Sbjct 16258 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAAAACATTTAGACCTGAA 16199 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| | || || || || || ||||| | || ||||| || || || || || || || Sbjct 16198 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 16139 Query 518297 ATAACGGC 518304 | ||| || Sbjct 16138 ACAACAGC 16131 Score = 87.8 bits (96), Expect = 1e-11 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||| | || ||||| || || |||||| | |||| || || || ||||||||||| Sbjct 15485 CAAACACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTTGCAGCGTCTCCAATCAGTC 15426 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || | || || |||| ||||| || || || | || || ||||| || |||| Sbjct 15425 GCTCACTATCGGTGAATGCTACATAGCTGGGTGTGGTCCTGTTTCCCTGATCGTTGGCAA 15366 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | || |||||||| |||| || | |||||||| || | ||||| || | ||||| Sbjct 15365 TGATCTCAACTTTGCCATGCTGGAAGACACCTACGCAGGAGTAGGTTGTCCCCAGATCAA 15306 Query 518703 TACCAA 518708 |||||| Sbjct 15305 TACCAA 15300 >seq1185 Length=427606 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| |||| ||||||||||||||||||||| || |||| || |||||| ||||| | | Sbjct 10800 CCATAAGCAATAGCAGCAGCAGTTGGTTCATTGATGATTCGCAGAACATTTAGACCTGAA 10741 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| | || || || || || ||||| | || ||||| || || || || || || || Sbjct 10740 ATTGTACCGGCGTCCTTGGTAGCTTGCCGCTGGGAATCATTGAAGTAAGCTGGTACCGTC 10681 Query 518297 ATAACGGC 518304 | ||| || Sbjct 10680 ACAACAGC 10673 Score = 89.7 bits (98), Expect = 4e-12 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||| | || ||||| || || |||||| | |||| || || || ||||||||||| Sbjct 10055 CAAACACTGTGTTGGTGGGGTTCATTGCAACCTGATTCTTTGCAGCGTCTCCAATCAGCC 9996 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || || || |||| ||||| || || || | || || ||||| || |||| Sbjct 9995 GCTCAGTATCGGTGAATGCTACATAGCTGGGTGTGGTCCTGTTTCCCTGATCGTTGGCAA 9936 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | || |||||||| |||| || | |||||||| || | ||||| || | ||||| Sbjct 9935 TGATCTCAACTTTGCCATGCTGGAAGACACCTACGCAGGAGTAGGTTGTCCCCAGATCAA 9876 Query 518703 TACC 518706 |||| Sbjct 9875 TACC 9872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3776891788505554