Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq18090 105 8e-18 seq16166 105 8e-18 >seq18090 Length=13718 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 ||| ||||| |||||||| | || || || |||| |||| | ||| || || || Sbjct 4961 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 5020 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| |||||| || ||||||||||||||||||||||| || Sbjct 5021 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCC 5080 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 |||||||||||| || | || | || | |||||| Sbjct 5081 CGTCTCCGTCTGCGATTCGATGACCGCGTACCACAC 5116 >seq16166 Length=16622 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 ||| ||||| |||||||| | || || || |||| |||| | ||| || || || Sbjct 9 CTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGTGCC 68 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| |||||| || ||||||||||||||||||||||| || Sbjct 69 CAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGTGCC 128 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 |||||||||||| || | || | || | |||||| Sbjct 129 CGTCTCCGTCTGCGATTCGATGACCGCGTACCACAC 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589396652635160