Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq36092 102 9e-17 seq8880 102 9e-17 seq1886 102 9e-17 >seq36092 Length=2431 Score = 102 bits (112), Expect = 9e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || |||| || || || || || | |||||||||||| || || || | Sbjct 1395 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 1336 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | |||||||| || |||||||| || ||||| ||||| || ||||| ||||| ||||| | Sbjct 1335 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 1276 Query 19103 CAAC 19106 | || Sbjct 1275 CTAC 1272 >seq8880 Length=37550 Score = 102 bits (112), Expect = 9e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || |||| || || || || || | |||||||||||| || || || | Sbjct 741 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 800 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | |||||||| || |||||||| || ||||| ||||| || ||||| ||||| ||||| | Sbjct 801 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 860 Query 19103 CAAC 19106 | || Sbjct 861 CTAC 864 >seq1886 Length=180247 Score = 102 bits (112), Expect = 9e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || |||| || || || || || | |||||||||||| || || || | Sbjct 87338 CCTCATCTCTGCTGATCAGCTCGTTGGAGAACGTGAGACCAGGCATCAGACCCCTCTTCT 87397 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | |||||||| || |||||||| || ||||| ||||| || ||||| ||||| ||||| | Sbjct 87398 TCAACCAGAAGATGGAAGCAAACGACCCAGAGAAGAAGATTCCTTCAACTGCAGCAAAGG 87457 Query 19103 CAAC 19106 | || Sbjct 87458 CTAC 87461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561552249050760