Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04]
79,209 sequences; 1,413,032,609 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq14962 147 2e-30
seq2502 147 2e-30
seq38573 91.5 1e-13
seq15079 91.5 1e-13
seq1434 91.5 1e-13
>seq14962
Length=18771
Score = 147 bits (162), Expect = 2e-30
Identities = 137/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||
Sbjct 9015 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 8956
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || | ||||||||| || |||| |||||| ||||| || || ||||| || || | |
Sbjct 8955 ACACCCAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 8896
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30042
|| || ||||| |||| || |||||| || || || ||||| ||| || ||||
Sbjct 8895 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 8842
Score = 123 bits (136), Expect = 2e-23
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
|||||| |||| || || || || || ||||||||||| ||||| || || |||| ||
Sbjct 7924 CATGTCTTTGTATTCAGCACCAAAGTGTCTCCACTGGAAACCGTAAACAGGGCCCAAATC 7865
Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269
|| || ||||||| || || |||||||||||||| || | ||| || || || ||
Sbjct 7864 CCCTTCCTCCCTGTTAGTAAATCCACTCTTGTCCAAAAAATCACGGGATCCATTTGCATC 7805
Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317
||| || || || || ||||| || ||||||||||| ||||| |||||
Sbjct 7804 CCAAATTTTCACACCTTTCTCCGACAGCTCTTTGGAATTTGTTGACCC 7757
>seq2502
Length=134960
Score = 147 bits (162), Expect = 2e-30
Identities = 137/174 (79%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
||||| |||| ||| || |||||||||||||| || | |||||||||||||| |||||
Sbjct 28407 AGCCCAGTGATGTGGGCGATCATGTACGTGAGCAGGGCATAGCTGGCGATGTTGAAGGGC 28466
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || | ||||||||| || |||| |||||| ||||| || || ||||| || || | |
Sbjct 28467 ACACCTAACCCCATGTCTCCGGACCGCTGGTACAGCTGGCAGGACAGCTCCCCATCACAC 28526
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCT 30042
|| || ||||| |||| || |||||| || || || ||||| ||| || ||||
Sbjct 28527 ACATAGAACTGGCACAGGGCGTGGCAGGGGGGCAGGGCCATCAGGGGCAGGTCT 28580
>seq38573
Length=2010
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166
||| |||||||| || | || ||||||| | |||| ||||| ||| ||| || || ||
Sbjct 599 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 540
Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
|||||| ||||| | |||||| ||||| ||||||||||| |||
Sbjct 539 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 497
>seq15079
Length=27813
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166
||| |||||||| || | || ||||||| | |||| ||||| ||| ||| || || ||
Sbjct 3811 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 3752
Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
|||||| ||||| | |||||| ||||| ||||||||||| |||
Sbjct 3751 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 3709
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166
||| |||||||| || | || ||||||| | |||| ||||| ||| ||| || || ||
Sbjct 10245 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 10186
Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
|||||| ||||| | |||||| ||||| ||||||||||| |||
Sbjct 10185 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 10143
>seq1434
Length=271241
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166
||| |||||||| || | || ||||||| | |||| ||||| ||| ||| || || ||
Sbjct 16093 CTCTCTGCTGAGAACAATATTGATCCTGTTTTTCAGGGGTCTGTTCCGTTCTGGAATTGA 16152
Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
|||||| ||||| | |||||| ||||| ||||||||||| |||
Sbjct 16153 GAACCACGTCTTCCGACCCATAATCACGACGTTCTGCTTACCT 16195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408223137041357
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |