Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq18171 127 4e-24 seq3116 127 4e-24 seq16166 114 2e-20 seq18090 113 8e-20 seq36092 102 2e-16 seq8880 102 2e-16 seq1886 102 2e-16 seq1416 93.3 8e-14 >seq18171 Length=35654 Score = 127 bits (140), Expect = 4e-24 Identities = 112/137 (82%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 |||||||| |||| || || || |||||||| || ||||||||| |||||||||||| Sbjct 27541 GGCGAGCGTGTGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCC 27482 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||||||||||||| ||| | | | || | |||||| || ||| ||| ||||||||||| Sbjct 27481 GCCATCTTCTGGCTGAAGAA-ACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCT 27423 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||| | ||||||| Sbjct 27422 CATCAGCCGAGACGAGG 27406 >seq3116 Length=119845 Score = 127 bits (140), Expect = 4e-24 Identities = 112/137 (82%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 |||||||| |||| || || || |||||||| || ||||||||| |||||||||||| Sbjct 115544 GGCGAGCGTGTGGTGGCGTTCGCGGCTGTGGAAGGGATCTTTTTCTCCGGTTCGTTTGCC 115485 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCT 25991 |||||||||||||| ||| | | | || | |||||| || ||| ||| ||||||||||| Sbjct 115484 GCCATCTTCTGGCTGAAGAA-ACGAGGCCTCATGCCGGGCCTGACCTTCTCCAACGAGCT 115426 Query 25992 CATCAGCAGGGACGAGG 26008 ||||||| | ||||||| Sbjct 115425 CATCAGCCGAGACGAGG 115409 >seq16166 Length=16622 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 ||||||| |||||||||||| |||||||| || || | |||||||| | | ||||||| Sbjct 915 ACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGATCGCGAGCCCGCTGC 974 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 |||||| || |||| ||| |||| |||| ||||| || |||||| |||||| ||| Sbjct 975 TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGC 1034 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGG 222177 ||||| || | ||| | || ||||| Sbjct 1035 TCCAGGTACATGGCGAACGCCCCGGG 1060 Score = 113 bits (124), Expect = 8e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 ||||||||||||| |||| |||| | |||||| || || |||||||||||||||||||| Sbjct 6 CACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGT 65 Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850 ||||||| | || || |||||| ||| ||||||||||||||||| |||| Sbjct 66 GCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGT 125 Query 221851 GCCAGTCTCC 221860 ||| |||||| Sbjct 126 GCCCGTCTCC 135 >seq18090 Length=13718 Score = 113 bits (124), Expect = 8e-20 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 ||||||||||||| |||| |||| | |||||| || || |||||||||||||||||||| Sbjct 4958 CACCTCGTCCTTGCTGGTGTACTCCACGATCTCGGTGCACAGGTTGCTGCACTTGATGGT 5017 Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850 ||||||| | || || |||||| ||| ||||||||||||||||| |||| Sbjct 5018 GCCCAGGTTCTGCTGGTTGCTCTTGCGGTTGCAGGCGTCCTTGTAGAGCATGTAGGGCGT 5077 Query 221851 GCCAGTCTCC 221860 ||| |||||| Sbjct 5078 GCCCGTCTCC 5087 Score = 111 bits (122), Expect = 3e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 ||||||| |||||||||||| |||||||| || || | ||||| || | | ||||||| Sbjct 5859 ACCCTCTTCATGAAGAGGTCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCCCGCTGC 5918 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 |||||| || |||| ||| |||| |||| ||||| || |||||| |||||| ||| Sbjct 5919 TCCTCCTTCCCCGTGTTCTTCTTCAGCTCCAGGAACTCGAAGATGTCAAAGTGCCAGGGC 5978 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGG 222177 ||||| || | ||| | || ||||| Sbjct 5979 TCCAGGTACATGGCGAACGCCCCGGG 6004 Score = 87.8 bits (96), Expect = 3e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478 |||||| |||| ||||||||||||||||||| ||||||| || |||||| || Sbjct 4330 CAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGCTGTTGAGCAGCTGGGCCTCCGGGCT 4389 Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 |||||| | |||| | ||| |||||||||| ||||| || ||||| ||||| Sbjct 4390 CTCGAAGGGGAAGCGCATGAGGATGAAGGCGTCGGCCAGGCCCTGCACCCCGATCCCGAT 4449 Query 221539 GGGCCTGTGTCTCCTGTTGGA 221559 |||||||| || | ||||| Sbjct 4450 CGGCCTGTGCCTTTTATTGGA 4470 >seq36092 Length=2431 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||||||||||||||| || || || ||||| ||| || |||||||| Sbjct 1260 GGGGAGCGCGTGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCT 1319 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||||||| | ||| ||| ||| ||||| || || || ||||||||||| Sbjct 1320 TCCATCTTCTGGTTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTG 1379 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 1380 ATCAGCAGAGATGAGG 1395 >seq8880 Length=37550 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||||||||||||||| || || || ||||| ||| || |||||||| Sbjct 876 GGGGAGCGTGTGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCT 817 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||||||| | ||| ||| ||| ||||| || || || ||||||||||| Sbjct 816 TCCATCTTCTGGTTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTG 757 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 756 ATCAGCAGAGATGAGG 741 >seq1886 Length=180247 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| |||||||||||||||| || || || ||||| ||| || |||||||| Sbjct 87473 GGGGAGCGCGTGGTAGCCTTTGCTGCAGTTGAAGGAATCTTCTTCTCTGGGTCGTTTGCT 87414 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||||||| | ||| ||| ||| ||||| || || || ||||||||||| Sbjct 87413 TCCATCTTCTGGTTGAAGAAGAGGGGTCTGATGCCTGGTCTCACGTTCTCCAACGAGCTG 87354 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 87353 ATCAGCAGAGATGAGG 87338 >seq1416 Length=277003 Score = 93.3 bits (102), Expect = 8e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 || ||||||||||| |||||||| || || ||| || || ||||| ||||||| |||| Sbjct 25579 GTGGCCTTTGCTGCGGTGGAGGGGATTTTCTTCTCTGGGTCCTTTGCAGCCATCTACTGG 25520 Query 25945 CTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGAC 26004 | ||| ||| || ||||||||| || || ||||| |||||||||||||| || Sbjct 25519 TTAAAGAAGAGAGGCCTCATGCCCGGACTCACCTACTCCAATGAGCTCATCAGCAGAGAT 25460 Query 26005 GAGG 26008 |||| Sbjct 25459 GAGG 25456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927925139152960