Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anguilla_20rostrata_20[genbank_20GCA_5F001606085.1_202016-04-04] 79,209 sequences; 1,413,032,609 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq6073 136 3e-26 seq5361 113 3e-19 seq1537 102 5e-16 seq1185 96.9 2e-14 seq1284 93.3 3e-13 seq2553 91.5 1e-12 >seq6073 Length=65956 Score = 136 bits (150), Expect = 3e-26 Identities = 359/546 (66%), Gaps = 4/546 (1%) Strand=Plus/Plus Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAG 474389 |||| || |||||| | ||||| || ||| || || | ||| | || | || || | Sbjct 26277 CAATCGGGATTGATCTGGGAACCACCTACTCCTGCGTGGGTGTGTTTCAGCACGGAAAGG 26336 Query 474390 TAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTG 474449 | ||||| |||||||| ||||| || || ||||| || || ||||| | || || | Sbjct 26337 TGGAAATCATTGCCAACGACCAGGGCAACAGAACCACCCCCAGCTATGTAGCCTTCACAG 26396 Query 474450 AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATA 474509 | || || || |||||||||||||| || | || | || || || || | Sbjct 26397 ATACCGAGAGGCTCATTGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCAACAACA 26456 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 | | |||||||| || | ||||||| | | || || ||| || ||| || |||| Sbjct 26457 CAGTCTTTGATGCCAAGCGGCTGATTGGCAGAAGGTTCGACGATGCCGTTGTGCAGTCTG 26516 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--C 474627 ||||| |||||||| || | |||| | | || ||| || || || | | ||| Sbjct 26517 ATATGAAGCATTGGCCCTTCAGGGTGGTCAGTGATGGGGGGAAGCCCAAAGTTCAAGTTG 26576 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 |||||| ||| || | ||| || | || ||| |||| || || ||||| | | Sbjct 26577 AATACA--AAGGAGAGTCCAAAACGTTCTACCCTGAAGAAATCTCCTCTATGGTGCTGGT 26634 Query 474688 CAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747 |||||||| | | ||| | || || || || || | | | ||||| || || Sbjct 26635 GAAAATGAAGGAGATCGCTGAAGCGTACCTGGGGCAGAAAATCTCAAACGCAGTCATCAC 26694 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 ||| ||||| ||||| || || ||||| || || || || || || ||||| || | Sbjct 26695 TGTGCCAGCGTATTTCAACGACTCTCAGCGCCAGGCCACCAAGGACGCGGGCGTGATCTC 26754 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 ||| || ||||| | || || || || || || || |||||||| | || || || || Sbjct 26755 AGGGCTCAATGTGCTGCGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTACGGCCT 26814 Query 474868 TGATAA 474873 || || Sbjct 26815 GGACAA 26820 >seq5361 Length=64650 Score = 113 bits (124), Expect = 3e-19 Identities = 356/547 (65%), Gaps = 6/547 (1%) Strand=Plus/Plus Query 474330 CAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAG 474389 |||| || |||||| | ||||| || ||| ||||| | ||| | || | || || | Sbjct 61668 CAATCGGGATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTGTTTCAGCACGGAAAGG 61727 Query 474390 TAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTG 474449 | ||||| |||||||| ||||| || || ||||| || || || || | || || | Sbjct 61728 TGGAAATCATTGCCAACGACCAGGGCAACAGAACCACCCCCAGCTACGTAGCCTTCACAG 61787 Query 474450 AAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATA 474509 | || || || || ||||||||||| || | || | || || || ||| | Sbjct 61788 ACACCGAGAGGCTGATCGGAGATGCTGCCAAGAACCAGGTGGCCATGAACCCCAATAACA 61847 Query 474510 CTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTG 474569 | | || ||||| || | ||||| || | | || || ||| || || ||||| | Sbjct 61848 CCGTCTTCGATGCCAAGCGCTTGATCGGCAGAAGGTTCGACGATCCCGTCGTGCAATCAG 61907 Query 474570 ATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAA--GC 474627 ||||| || ||||| || ||||| | | ||| || || || | | ||| | Sbjct 61908 ATATGAAGCACTGGCCCTTCAAGGTAGTCAGCAATGGAGGAAAGCCCAAAGTTGAAGTGG 61967 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 |||||| ||| || | |||| ||| || ||| |||| || || ||||| | | Sbjct 61968 AATACA--AAGGAGAGAGTAAAGCATTCAACCCTGAAGAAATCTCCTCGATGGTGCTGGT 62025 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||||| | | || ||| | || || || || | || | |||| || || | Sbjct 62026 TAAAATGAAGGAGATTGCTGAG-GCCTACCTGGGGCAGAAGGTGTCAAATGCGGTCATCA 62084 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 |||| || || || || || || ||||| || || || || ||||| || || || | Sbjct 62085 CTGTCCCCGCGTACTTCAACGACTCTCAGCGCCAGGCCACCAAAGACGCCGGCGTGATCG 62144 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTC 474866 | || || || ||| | | || || || || || || |||||||| | || || || | Sbjct 62145 CCGGGCTCAACGTTCTGAGGATCATCAACGAGCCCACGGCAGCCGCCATCGCCTACGGCC 62204 Query 474867 TTGATAA 474873 | ||||| Sbjct 62205 TGGATAA 62211 >seq1537 Length=339721 Score = 102 bits (112), Expect = 5e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || |||||||| || || ||||| || || || || || | |||| Sbjct 16140 ACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACCAAGGACGCCGGTACAATT 16199 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||||| |||||||| || || || ||||||||||| || || || |||||||||| Sbjct 16200 TCAGGTCTAAATGTTTTGCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGA 16259 Query 474866 CTTGATAAGAA 474876 | || ||||| Sbjct 16260 TTGGACAAGAA 16270 >seq1185 Length=427606 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || || ||||| || || |||||||| || || ||||| || || || || || | |||| Sbjct 10682 ACGGTACCAGCTTACTTCAATGATTCCCAGCGGCAAGCTACCAAGGACGCCGGTACAATT 10741 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||||||| |||||| | || || || ||||||||||| || || || |||||||||| Sbjct 10742 TCAGGTCTAAATGTTCTGCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTATGGA 10801 Query 474866 CTTGATAAGAA 474876 | || ||||| Sbjct 10802 TTGGACAAGAA 10812 >seq1284 Length=345789 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/143 (75%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||| || |||| || || || || || || || || ||||| || || ||||| || || Sbjct 258676 AGTTACCAATGCTGTGATCACGGTGCCCGCCTACTTCAATGACTCCCAGCGTCAGGCTAC 258617 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 |||||||| |||| || | ||||||||||| | ||||| || || || |||||||| Sbjct 258616 CAAAGATGCTGGAACTATCTCTGGTCTTAATGTGCTGCGTATCATCAACGAGCCAACAGC 258557 Query 474847 AGCCGCACTTGCTTATGGTCTTG 474869 || ||| |||| ||||| |||| Sbjct 258556 TGCTGCAATTGCATATGG-CTTG 258535 Score = 86.0 bits (94), Expect = 4e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 474347 GGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAAT 474406 || || || ||| |||||||| |||| ||| |||| ||||| || || ||||||||| Sbjct 259530 GGGACCACCTACTCTTGTGTAGGAGTTTTCCAACATGGAAAAGTTGAGATCATTGCCAAT 259471 Query 474407 GACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATT 474466 ||||| ||||| || || || || || || | || ||||| ||||| | | ||| Sbjct 259470 GACCAGGGTAACAGGACCACCCCCAGTTACGTAGCATTCACTGATACTGAGCGATTGATT 259411 Query 474467 GGAGATGCTGCTAAATATCAAGCTGCA 474493 || ||||| || || |||||| |||| Sbjct 259410 GGGGATGCAGCAAAGAATCAAGTTGCA 259384 >seq2553 Length=132868 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 28889 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 28830 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 28829 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 28770 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 28769 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 28737 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 29117 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 29058 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 29057 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 28998 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 28997 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 28965 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 29345 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 29286 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 29285 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 29226 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 29225 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 29193 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 29573 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 29514 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 29513 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 29454 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 29453 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 29421 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 29801 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 29742 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 29741 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 29682 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 29681 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 29649 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 30573 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 30514 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 30513 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 30454 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 30453 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 30421 Score = 91.5 bits (100), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| || |||||||||||||| || || | || || ||||||||||| |||||||| Sbjct 30801 ATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCAGGAGGAATGCCTTCCTT 30742 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| || ||||| |||||| ||||| || ||| || | || |||||||| Sbjct 30741 GTCCTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTAAT 30682 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| || || || || Sbjct 30681 GGTCTTGCCAGTCAGGGTCTTCACAAAGATCTG 30649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3264781541667932